RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SLC17A8Q8NDX2 589 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 TMEM40Q8WWA1 233 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 SCLYQ96I15 445 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 PLIN2Q99541 437 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 FTHL17Q9BXU8 183 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-207ENST00000415107 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
ATG4B-207ENST00000415107 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 GPR182O15218 404 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 HIP1RO75146 1068 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
ATG4B-207ENST00000415107 ABCD1P33897 745 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 SYKP43405 635 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 PHKA2P46019 1235 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 NDUFA8P51970 172 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 UBE2HP62256 183 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 GIT2Q14161 759 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 FAM102BQ5T8I3 360 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 C16orf59Q7L2K0 433 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 PDILTQ8N807 584 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 ENGASEQ8NFI3 743 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 HERVK_113Q902F9 699 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 OSMRQ99650 979 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
ATG4B-207ENST00000415107 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 AGO3Q9H9G7 860 aaKnown RBP13.19□□□□□ -0.3
ATG4B-207ENST00000415107 ERVK-5Q9HDB9 667 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-207ENST00000415107 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
ATG4B-207ENST00000415107 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 SEL1LQ9UBV2 794 aa13.19□□□□□ -0.3
ATG4B-207ENST00000415107 A0A087WZ62 844 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 MYMKA6NI61 221 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 H0YCG3 227 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 GHRP10912 638 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 ACTN1P12814 892 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 PLS3P13797 630 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 EFNA5P52803 228 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 EPHB4P54760 987 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 TMEM62Q0P6H9 643 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 PAK2Q13177 524 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 DMP1Q13316 513 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 FMR1NBQ8N0W7 255 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 SEPT8Q92599 483 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 DDX12PQ92771 950 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 DHX58Q96C10 678 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 MTIF3Q9H2K0 278 aaKnown RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 ST6GALNAC4Q9H4F1 302 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 OLFML3Q9NRN5 406 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
ATG4B-207ENST00000415107 MICAL3Q7RTP6 2002 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
ATG4B-207ENST00000415107 ZNF202O95125 648 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATG4B-207ENST00000415107 GAP43P17677 238 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 AXLP30530 894 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 NPTX2P47972 431 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
ATG4B-207ENST00000415107 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms