RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 PER2O15055 1255 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 HOXA2O43364 376 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 MAFO75444 373 aaPredicted RBP17.42■□□□□ 0.38
ACTB-202ENST00000414620 SEC24BO95487 1268 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
ACTB-202ENST00000414620 NEK4P51957 841 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 ERVFC1P60507 584 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 RBM10P98175 930 aaKnown RBP17.42■□□□□ 0.38
ACTB-202ENST00000414620 SMAD4Q13485 552 aaKnown RBP17.42■□□□□ 0.38
ACTB-202ENST00000414620 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 TMEM31Q5JXX7 168 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 PLPP4Q5VZY2 271 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
ACTB-202ENST00000414620 LXNQ9BS40 222 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 TLE6Q9H808 572 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 BRMS1Q9HCU9 246 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 C11orf16Q9NQ32 467 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 CYP26B1Q9NR63 512 aa17.42■□□□□ 0.38
ACTB-202ENST00000414620 PI4K2BG5E9Z4 385 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 GLP2RO95838 553 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 P4HBP07237 508 aaKnown RBP17.41■□□□□ 0.38
ACTB-202ENST00000414620 SFPQP23246 707 aaKnown RBP eCLIP17.41■□□□□ 0.38
ACTB-202ENST00000414620 CYP4A11Q02928 519 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 UBE3AQ05086 875 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
ACTB-202ENST00000414620 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
ACTB-202ENST00000414620 EFHBQ8N7U6 833 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 TNFRSF25Q93038 417 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 LPPQ93052 612 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 CEP170P1Q96L14 293 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 ZNF558Q96NG5 402 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 NAP1L4Q99733 375 aaKnown RBP17.41■□□□□ 0.38
ACTB-202ENST00000414620 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 RGL1Q9NZL6 768 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 CLEC1BQ9P126 229 aa17.41■□□□□ 0.38
ACTB-202ENST00000414620 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
ACTB-202ENST00000414620 A0A0U1RQF3 1178 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 TBX3O15119 743 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■□□ 17.9
ACTB-202ENST00000414620 POLGP54098 1239 aaPredicted RBP17.4■□□□□ 0.38
ACTB-202ENST00000414620 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 EPHA7Q15375 998 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 SMAD2Q15796 467 aaKnown RBP17.4■□□□□ 0.38
ACTB-202ENST00000414620 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 KCNT2Q6UVM3 1135 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 CATSPER4Q7RTX7 472 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 ZNF598Q86UK7 904 aaKnown RBP17.4■□□□□ 0.38
ACTB-202ENST00000414620 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 ADHFE1Q8IWW8 467 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 MRPS27Q92552 414 aaKnown RBP17.4■□□□□ 0.38
ACTB-202ENST00000414620 TMEM143Q96AN5 459 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 MSLNLQ96KJ4 702 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 ENTPD7Q9NQZ7 604 aa17.4■□□□□ 0.38
ACTB-202ENST00000414620 TDRD15B5MCY1 1934 aaKnown RBP17.4■□□□□ 0.38
ACTB-202ENST00000414620 BDP1A6H8Y1 2624 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 WNT7AO00755 349 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 FSCN2O14926 492 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
ACTB-202ENST00000414620 YWHABP31946 246 aaKnown RBP17.39■□□□□ 0.37
ACTB-202ENST00000414620 SLC7A3Q8WY07 619 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 TCF25Q9BQ70 676 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 JPH2Q9BR39 696 aaPredicted RBP17.39■□□□□ 0.37
ACTB-202ENST00000414620 PRKAG3Q9UGI9 489 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 COL4A3BPQ9Y5P4 624 aa17.39■□□□□ 0.37
ACTB-202ENST00000414620 MEIS3P2A8K0S8 358 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 NT5C1B-RDH14C9J2C7 533 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 ZBTB39O15060 712 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 PHKA2P46019 1235 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 CDC42EP1Q00587 391 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 PLCB3Q01970 1234 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 GUCY1B3Q02153 619 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 SPIRE1Q08AE8 756 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 TRIM29Q14134 588 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 EMC2Q15006 297 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 DUSP6Q16828 381 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 XKR9Q5GH70 373 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
ACTB-202ENST00000414620 SLFN12Q8IYM2 578 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 VN1R2Q8NFZ6 395 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 INO80BQ9C086 356 aaPredicted RBP17.38■□□□□ 0.37
ACTB-202ENST00000414620 DHX33Q9H6R0 707 aaKnown RBP17.38■□□□□ 0.37
ACTB-202ENST00000414620 CHST12Q9NRB3 414 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 INPP5FQ9Y2H2 1132 aa17.38■□□□□ 0.37
ACTB-202ENST00000414620 C19orf67A6NJJ6 358 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 EOMESO95936 686 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 SRGAP2CP0DJJ0 459 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 CA8P35219 290 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 CALCRLQ16602 461 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 LLGL2Q6P1M3 1020 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 SLC39A11Q8N1S5 342 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 PSPC1Q8WXF1 523 aaKnown RBP17.37■□□□□ 0.37
ACTB-202ENST00000414620 IFT122Q9HBG6 1241 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 SPG21Q9NZD8 308 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms