RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 CLEC1BQ9P126 229 aa18.75■□□□□ 0.59
SF1-207ENST00000413951 SMC3Q9UQE7 1217 aa18.75■□□□□ 0.59
SF1-207ENST00000413951 KIF3AQ9Y496 699 aa18.75■□□□□ 0.59
SF1-207ENST00000413951 A0A0U1RQF3 1178 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 ZNF862O60290 1169 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 FGFR1P11362 822 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 DARSP14868 501 aaKnown RBP18.74■□□□□ 0.59
SF1-207ENST00000413951 ATF7P17544 494 aaPredicted RBP18.74■□□□□ 0.59
SF1-207ENST00000413951 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
SF1-207ENST00000413951 DUSP6Q16828 381 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 ECHDC2Q86YB7 292 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 RNF135Q8IUD6 432 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 LRRC71Q8N4P6 559 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 TNFRSF25Q93038 417 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 C8orf76Q96K31 380 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 NAP1L4Q99733 375 aaKnown RBP18.74■□□□□ 0.59
SF1-207ENST00000413951 UNC45AQ9H3U1 944 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 CWH43Q9H720 699 aa18.74■□□□□ 0.59
SF1-207ENST00000413951 PSMD10O75832 226 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 SFPQP23246 707 aaKnown RBP eCLIP18.73■□□□□ 0.59
SF1-207ENST00000413951 NONOQ15233 471 aaKnown RBP eCLIP18.73■□□□□ 0.591e-6■■■■■ 28.9
SF1-207ENST00000413951 KCNT2Q6UVM3 1135 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 TMEM184AQ6ZMB5 413 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 KRT25Q7Z3Z0 450 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 CASD1Q96PB1 797 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 PHF7Q9BWX1 381 aaPredicted RBP18.73■□□□□ 0.59
SF1-207ENST00000413951 ENTPD7Q9NQZ7 604 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 SPG21Q9NZD8 308 aa18.73■□□□□ 0.59
SF1-207ENST00000413951 SEPT9Q9UHD8 586 aaPredicted RBP18.73■□□□□ 0.59
SF1-207ENST00000413951 MYH9P35579 1960 aaKnown RBP18.73■□□□□ 0.59
SF1-207ENST00000413951 FSCN2O14926 492 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 HOXB8P17481 243 aaPredicted RBP18.72■□□□□ 0.59
SF1-207ENST00000413951 TRIM29Q14134 588 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 TARBP2Q15633 366 aaKnown RBP18.72■□□□□ 0.59
SF1-207ENST00000413951 ZNF410Q86VK4 478 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 EDAQ92838 391 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 TCF25Q9BQ70 676 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 BARX2Q9UMQ3 279 aaPredicted RBP18.72■□□□□ 0.59
SF1-207ENST00000413951 PPME1Q9Y570 386 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 MYO7AQ13402 2215 aa18.72■□□□□ 0.59
SF1-207ENST00000413951 LOXHD1Q8IVV2 1947 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 LOC730098B7Z3J9 87 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 GLP2RO95838 553 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 KRT2P35908 639 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 ALDH7A1P49419 539 aaKnown RBP18.71■□□□□ 0.59
SF1-207ENST00000413951 ERVFC1P60507 584 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 PSMC5P62195 406 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 MTERF2Q49AM1 385 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 RNF169Q8NCN4 708 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 FAM20AQ96MK3 541 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 MBOAT7Q96N66 472 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 TRAIPQ9BWF2 469 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 DDX25Q9UHL0 483 aaKnown RBP18.71■□□□□ 0.59
SF1-207ENST00000413951 MUTYHQ9UIF7 546 aa18.71■□□□□ 0.59
SF1-207ENST00000413951 USP15Q9Y4E8 981 aaPredicted RBP18.71■□□□□ 0.59
SF1-207ENST00000413951 CCDC194A0A1B0GVG4 234 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 PER2O15055 1255 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 GCFC2P16383 781 aaKnown RBP18.7■□□□□ 0.58
SF1-207ENST00000413951 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
SF1-207ENST00000413951 CBX2Q14781 532 aaPredicted RBP18.7■□□□□ 0.58
SF1-207ENST00000413951 UGCGQ16739 394 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 PLPP4Q5VZY2 271 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 TMC7Q7Z402 723 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 DIS3L2Q8IYB7 885 aaKnown RBP18.7■□□□□ 0.58
SF1-207ENST00000413951 CASP10Q92851 521 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 BRMS1Q9HCU9 246 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 STK39Q9UEW8 545 aa18.7■□□□□ 0.58
SF1-207ENST00000413951 EVPLQ92817 2033 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 IGKV6-21A0A0C4DH24 114 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 DDX11L8A8MPP1 907 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 BTBD18B2RXH4 712 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 EDIL3O43854 480 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 MAFO75444 373 aaPredicted RBP18.69■□□□□ 0.58
SF1-207ENST00000413951 TDP2O95551 362 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 RAB27AP51159 221 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 NR5A1Q13285 461 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 GIT2Q14161 759 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 B3GNT9Q6UX72 402 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 BMP8AQ7Z5Y6 402 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 TMEM87AQ8NBN3 555 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 ETNPPLQ8TBG4 499 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 SLC7A3Q8WY07 619 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 PRRX2Q99811 253 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 FOXP1Q9H334 677 aaPredicted RBP18.69■□□□□ 0.58
SF1-207ENST00000413951 SUCLA2Q9P2R7 463 aaPredicted RBP18.69■□□□□ 0.58
SF1-207ENST00000413951 KIAA1671Q9BY89 1806 aa18.69■□□□□ 0.58
SF1-207ENST00000413951 FNDC1Q4ZHG4 1894 aaPredicted RBP18.69■□□□□ 0.58
SF1-207ENST00000413951 TBX3O15119 743 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 MARCH6O60337 910 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 PDCP20941 246 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 TECP42680 631 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 QARSP47897 775 aaKnown RBP18.68■□□□□ 0.58
SF1-207ENST00000413951 FOSBP53539 338 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 GUCY1B3Q02153 619 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 BECN1Q14457 450 aa18.68■□□□□ 0.58
SF1-207ENST00000413951 EARS2Q5JPH6 523 aaKnown RBP18.68■□□□□ 0.58
SF1-207ENST00000413951 TWF2Q6IBS0 349 aaKnown RBP18.68■□□□□ 0.58
SF1-207ENST00000413951 PPP4R3AQ6IN85 833 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms