RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ERVK-21P61565 698 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 FAM189BP81408 668 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 MXD4Q14582 209 aaPredicted RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ASAP3Q8TDY4 903 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ARNTL2Q8WYA1 636 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ZNF689Q96CS4 500 aaPredicted RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 TGS1Q96RS0 853 aaKnown RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ZSCAN16Q9H4T2 348 aaPredicted RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 MINDY3Q9H8M7 445 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 DDX19AQ9NUU7 478 aaKnown RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 MICAL3Q7RTP6 2002 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 WDR81Q562E7 1941 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 ADGRA3Q8IWK6 1321 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 E9PMD0 336 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 CYP11B2P19099 503 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 IBSPP21815 317 aaPredicted RBP11.19□□□□□ -0.62
TMEM248-202ENST00000413593 GLRA2P23416 452 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 PHKA2P46019 1235 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 PTENP60484 403 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 POU5F1BQ06416 359 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 CAPSQ13938 189 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 TFDP1Q14186 410 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 ADGRE1Q14246 886 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 PTPAQ15257 358 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 HYIQ5T013 277 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 MAEAQ7L5Y9 396 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 CATSPER4Q7RTX7 472 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 KCNK18Q7Z418 384 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
TMEM248-202ENST00000413593 AK8Q96MA6 479 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 PNMA5Q96PV4 448 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 GAS2L1Q99501 681 aaPredicted RBP11.19□□□□□ -0.62
TMEM248-202ENST00000413593 CHST12Q9NRB3 414 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 MTUS1Q9ULD2 1270 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
TMEM248-202ENST00000413593 A0A0U1RQF3 1178 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 RFXAPO00287 272 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 EYA4O95677 639 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 PDIA4P13667 645 aaKnown RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 LONP1P36776 959 aaKnown RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 GATMP50440 423 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 GRIN1Q05586 938 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 GRB10Q13322 594 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 FAM102BQ5T8I3 360 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 ECHDC2Q86YB7 292 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 CMTR2Q8IYT2 770 aaKnown RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 FIBCD1Q8N539 461 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 KCTD17Q8N5Z5 321 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 USP28Q96RU2 1077 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 C17orf80Q9BSJ5 609 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 NT5C3AQ9H0P0 336 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 ELAC1Q9H777 363 aaKnown RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 AGPAT5Q9NUQ2 364 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 DACT1Q9NYF0 836 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 PIN4Q9Y237 131 aaKnown RBP11.18□□□□□ -0.62
TMEM248-202ENST00000413593 PCDHB7Q9Y5E2 793 aa11.18□□□□□ -0.62
TMEM248-202ENST00000413593 SLC26A4O43511 780 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 LPXNO60711 386 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 IGFBP4P22692 258 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 MARCKSP29966 332 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 UBA7P41226 1012 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 PCBP1Q15365 356 aaKnown RBP eCLIP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 CABP7Q86V35 215 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 TMEM192Q8IY95 271 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 BSNDQ8WZ55 320 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 CLP1Q92989 425 aaKnown RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 SAMD11Q96NU1 681 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 PLIN2Q99541 437 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 TRAIPQ9BWF2 469 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 FBXO2Q9UK22 296 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 MRPL42Q9Y6G3 142 aaKnown RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 MORC2Q9Y6X9 1032 aaPredicted RBP11.17□□□□□ -0.62
TMEM248-202ENST00000413593 EVPLQ92817 2033 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 GBF1Q92538 1859 aa11.17□□□□□ -0.62
TMEM248-202ENST00000413593 TTC3P53804 2025 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 TSPAN1O60635 241 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms