RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TMEM105Q8N8V8 129 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 BCL7CQ8WUZ0 217 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-210ENST00000413578 ATOH1Q92858 354 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-210ENST00000413578 SLC5A5Q92911 643 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 RIT2Q99578 217 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 UNC45AQ9H3U1 944 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 SMOC2Q9H3U7 446 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 SAMM50Q9Y512 469 aa13.73□□□□□ -0.21
LIMS2-210ENST00000413578 H0Y858 1186 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
LIMS2-210ENST00000413578 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
LIMS2-210ENST00000413578 SFNP31947 248 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 MTHFRP42898 656 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 PHKA2P46019 1235 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
LIMS2-210ENST00000413578 JAK3P52333 1124 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 POLGP54098 1239 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-210ENST00000413578 TBC1D8BQ0IIM8 1120 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 CES5AQ6NT32 575 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 DDX53Q86TM3 631 aaKnown RBP13.72□□□□□ -0.21
LIMS2-210ENST00000413578 SLC22A17Q8WUG5 538 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 IGSF21Q96ID5 467 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 VN1R3Q9BXE9 311 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 NIFKQ9BYG3 293 aaKnown RBP13.72□□□□□ -0.21
LIMS2-210ENST00000413578 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 DZANK1Q9NVP4 752 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 USTQ9Y2C2 406 aa13.72□□□□□ -0.21
LIMS2-210ENST00000413578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-210ENST00000413578 MEIS3P2A8K0S8 358 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 PSMD10O75832 226 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 CXCL14O95715 111 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 ASGR2P07307 311 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 CTSAP10619 480 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 CPA1P15085 419 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 EPCAMP16422 314 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 NBL1P41271 181 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 USP11P51784 963 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 RARS2Q5T160 578 aaKnown RBP13.71□□□□□ -0.21
LIMS2-210ENST00000413578 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 C12orf76Q8N812 135 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-210ENST00000413578 RDM1Q8NG50 284 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 NLRP7Q8WX94 980 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 AUTS2Q8WXX7 1259 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 PHKBQ93100 1093 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 GJA10Q969M2 543 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 TMEM169Q96HH4 297 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-210ENST00000413578 NRDE2Q9H7Z3 1164 aa13.71□□□□□ -0.21
LIMS2-210ENST00000413578 GVINP1Q7Z2Y8 2422 aa13.71□□□□□ -0.22
LIMS2-210ENST00000413578 CARNS1A5YM72 827 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 TMEM150BA6NC51 233 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 CHMP2AO43633 222 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 B4GALT3O60512 393 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 GAS7O60861 476 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 ZNF623O75123 536 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.22
LIMS2-210ENST00000413578 GALTP07902 379 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 CDC42EP1Q00587 391 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 GIT2Q14161 759 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 Q4G0T1 1027 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 XKR3Q5GH77 459 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 LRCH2Q5VUJ6 765 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 Q6ZUG5 572 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 SKAP1Q86WV1 359 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
LIMS2-210ENST00000413578 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 BRF1Q92994 677 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 LPPQ93052 612 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 MBOAT7Q96N66 472 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 SCLT1Q96NL6 688 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 TEKT3Q9BXF9 490 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-210ENST00000413578 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 SPTBN4Q9H254 2564 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
LIMS2-210ENST00000413578 CYP3A7-CYP3A51PA0A087WV96 503 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 A0A087WZ62 844 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 PRR23AA6NEV1 266 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 OFD1O75665 1012 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 IFNAR1P17181 557 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIMS2-210ENST00000413578 CYP3A7P24462 503 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 EVCP57679 992 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
LIMS2-210ENST00000413578 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
LIMS2-210ENST00000413578 CWF19L1Q69YN2 538 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms