RNA–Protein interactions for RNA: ENST00000412148.5

CCDC88A-203, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 1 (best)

Gene CCDC88A, Length 2,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-203ENST00000412148 GZMAP12544 262 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 RARGP13631 454 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 SKIV2L2P42285 1042 aaKnown RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 TNNI2P48788 182 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 CCNG1P51959 295 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 NUBP1P53384 320 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 PMS2P54278 862 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 MAGOHP61326 146 aaKnown RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 DR1Q01658 176 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 ATP2B2Q01814 1243 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 ALCAMQ13740 583 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 ZNF268Q14587 947 aaPredicted RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 CRYMQ14894 314 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 GRIK5Q16478 980 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 QPCTQ16769 361 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 KIAA1755Q5JYT7 1200 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 DCAF12L1Q5VU92 463 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 TTC19Q6DKK2 380 aaPredicted RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 ZDHHC24Q6UX98 284 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 SYDE1Q6ZW31 735 aaPredicted RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 STXBP4Q6ZWJ1 553 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 TRMT10CQ7L0Y3 403 aaKnown RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 CATSPER3Q86XQ3 398 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 RELL1Q8IUW5 271 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 MAGOHBQ96A72 148 aaKnown RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 CCDC114Q96M63 670 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 REEP2Q9BRK0 252 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 GPR88Q9GZN0 384 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 NSRP1Q9H0G5 558 aaKnown RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 BATF3Q9NR55 127 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 AMACRQ9UHK6 382 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 VAV3Q9UKW4 847 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 ODF2LQ9ULJ1 636 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 PACSIN2Q9UNF0 486 aaPredicted RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 NOVA2Q9UNW9 492 aaKnown RBP6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 TRPC6Q9Y210 931 aa6.21□□□□□ -1.41
CCDC88A-203ENST00000412148 POTEB3A0JP26 581 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 POTECB2RU33 542 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 MEIS2O14770 477 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 TTI1O43156 1089 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 TGFB1I1O43294 461 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 EVI5O60447 810 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 BUB1BO60566 1050 aaPredicted RBP6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 ZPR1O75312 459 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 BBOX1O75936 387 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 PYGBP11216 843 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 ERCC3P19447 782 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 ELF1P32519 619 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 FKBP1AP62942 108 aaKnown RBP6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 CCDC15Q0P6D6 951 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 GALNTL6Q49A17 601 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 POTEBQ6S5H4 581 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 DAAM2Q86T65 1068 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 FAM228AQ86W67 206 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 GMCL1P1Q8NEA9 526 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 UBLCP1Q8WVY7 318 aaPredicted RBP6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 CD101Q93033 1021 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 WNT8AQ9H1J5 351 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 PPANQ9NQ55 473 aaKnown RBP6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 GRHL1Q9NZI5 618 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 GCNT4Q9P109 453 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 SERPINB13Q9UIV8 391 aa6.21□□□□□ -1.42
CCDC88A-203ENST00000412148 WFS1O76024 890 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 EZRP15311 586 aaKnown RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 ATP5DP30049 168 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 SHMT1P34896 483 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 FLT3P36888 993 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 FMO5P49326 533 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 CASP5P51878 434 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 SLC18A1P54219 525 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 PPP2R5CQ13362 524 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 KRT71Q3SY84 523 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 CMPK2Q5EBM0 449 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 HHIPL2Q6UWX4 724 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 TAOK1Q7L7X3 1001 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 SFR1Q86XK3 245 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 LARGE2Q8N3Y3 721 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 SLC35G2Q8TBE7 412 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 CTNNBL1Q8WYA6 563 aaPredicted RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 ARHGEF1Q92888 912 aaKnown RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 ART4Q93070 314 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 HVCN1Q96D96 273 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 SERPINB12Q96P63 405 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 CRAMP1Q96RY5 1269 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 UBA5Q9GZZ9 404 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 CPVLQ9H3G5 476 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 APEX2Q9UBZ4 518 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 MTRF1LQ9UGC7 380 aaKnown RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 SAP30BPQ9UHR5 308 aaKnown RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 ACTL7BQ9Y614 415 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 RPTORQ8N122 1335 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 LIN7AO14910 233 aaPredicted RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 FGGP02679 453 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 ITGA4P13612 1032 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 AKR1B1P15121 316 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 HPDP32754 393 aaPredicted RBP6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 MAN1A1P33908 653 aa6.2□□□□□ -1.42
CCDC88A-203ENST00000412148 PDE6CP51160 858 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms