RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DDX21Q9NR30 783 aaKnown RBP eCLIP5.54□□□□□ -1.52
BRCA1-204ENST00000412061 UCKL1Q9NWZ5 548 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 SIRT5Q9NXA8 310 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 GTF2A1LQ9UNN4 478 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 IPPQ9Y573 584 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 CFAP69A5D8W1 941 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF839A8K0R7 811 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF500O60304 480 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 H2AFYO75367 372 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 PRPF6O94906 941 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 IL33O95760 270 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 PRLP01236 227 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ITGB5P18084 799 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ENPP1P22413 925 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 FBLN1P23142 703 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 MC4RP32245 332 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 MANFP55145 182 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 PFKPQ01813 784 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 SLC6A3Q01959 620 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ALDH6A1Q02252 535 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 MOGSQ13724 837 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 TARBP2Q15633 366 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 FSCN1Q16658 493 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 PRAMEF9Q5VWM5 478 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 TTLL7Q6ZT98 887 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 PROSER1Q86XN7 944 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 FAM186BQ8IYM0 893 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 CMTR2Q8IYT2 770 aaKnown RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 FAM26EQ8N5C1 309 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 IGDCC4Q8TDY8 1250 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ORAI2Q96SN7 254 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 INO80BQ9C086 356 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 WNT8AQ9H1J5 351 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 SEMA4AQ9H3S1 761 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 SLC39A2Q9NP94 309 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 CCM2LQ9NUG4 571 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 KLHL11Q9NVR0 708 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF69Q9UC07 566 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 DMTF1Q9Y222 760 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-204ENST00000412061 IRS2Q9Y4H2 1338 aa5.53□□□□□ -1.52
BRCA1-204ENST00000412061 ST20-MTHFSA0A0A6YYL1 179 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 ZNF503-AS2A6NEH8 195 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 EXOC5O00471 708 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 ELL2O00472 640 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-204ENST00000412061 PEX10O60683 326 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 APOL3O95236 402 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 MPIG6BO95866 241 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 C8BP07358 591 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 LDHCP07864 332 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 CYP2C8P10632 490 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 PFKLP17858 780 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 VCAM1P19320 739 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 SARSP49591 514 aaKnown RBP5.52□□□□□ -1.53
BRCA1-204ENST00000412061 AK2P54819 239 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 GJA9P57773 515 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 CLUL1Q15846 466 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 UGT8Q16880 541 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 SLFN12LQ6IEE8 588 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 CYB5RLQ6IPT4 315 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 KIAA1841Q6NSI8 718 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 LIPIQ6XZB0 460 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 TGFBRAP1Q8WUH2 860 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 LIN37Q96GY3 246 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-204ENST00000412061 NEUROD6Q96NK8 337 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 CDC5LQ99459 802 aaKnown RBP5.52□□□□□ -1.53
BRCA1-204ENST00000412061 MYD88Q99836 296 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 MYL10Q9BUA6 226 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 ANO3Q9BYT9 981 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 EPB41L4BQ9H329 900 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 PCDH18Q9HCL0 1135 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 DLL4Q9NR61 685 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 DNAJC28Q9NX36 388 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 GALNT8Q9NY28 637 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 FAM53CQ9NYF3 392 aa5.52□□□□□ -1.53
BRCA1-204ENST00000412061 C9orf78Q9NZ63 289 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-204ENST00000412061 KLHL33A6NCF5 533 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 F5H423 210 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-204ENST00000412061 NFIBO00712 420 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 XPOTO43592 962 aaKnown RBP5.51□□□□□ -1.53
BRCA1-204ENST00000412061 CTNND1O60716 968 aaKnown RBP5.51□□□□□ -1.53
BRCA1-204ENST00000412061 FAM163BP0C2L3 166 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 CLEC2LP0C7M8 214 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 SETSIPP0DME0 302 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 HSPA6P17066 643 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 ADCY2Q08462 1091 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 SIM2Q14190 667 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-204ENST00000412061 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 CT83Q5H943 113 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 ZBTB41Q5SVQ8 909 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 L1TD1Q5T7N2 865 aaKnown RBP5.51□□□□□ -1.53
BRCA1-204ENST00000412061 XRRA1Q6P2D8 792 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 CCDC62Q6P9F0 684 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 TMC5Q6UXY8 1006 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 LDHDQ86WU2 507 aa5.51□□□□□ -1.53
BRCA1-204ENST00000412061 PDILTQ8N807 584 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms