RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ASAP2O43150 1006 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 HIP1RO75146 1068 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 SRGAP2CP0DJJ0 459 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 EIF4BP23588 611 aaKnown RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 WDR5P61964 334 aaKnown RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 DEFB103AP81534 67 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 CDC42EP1Q00587 391 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 NFX1Q12986 1120 aaKnown RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 MAPK7Q13164 816 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 IKBKEQ14164 716 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 MXD4Q14582 209 aaPredicted RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 NAALADL2Q58DX5 795 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 FAM109BQ6ICB4 259 aaPredicted RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 GPBP1Q86WP2 473 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 LINC01599Q8WXQ3 324 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 SCAND2PQ9GZW5 306 aaPredicted RBP15.47■□□□□ 0.07
CPNE1-206ENST00000412056 TMX1Q9H3N1 280 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 IFT122Q9HBG6 1241 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 ST3GAL5Q9UNP4 418 aa15.47■□□□□ 0.07
CPNE1-206ENST00000412056 NPHP3-ACAD11A0A0J9YXS1 232 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-206ENST00000412056 MGEA5O60502 916 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 STAT6P42226 847 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 KCNJ6P48051 423 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-206ENST00000412056 TFDP1Q14186 410 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 HABP4Q5JVS0 413 aaKnown RBP15.46■□□□□ 0.07
CPNE1-206ENST00000412056 RESP18Q5W5W9 173 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.46■□□□□ 0.071e-8■■□□□ 11.7
CPNE1-206ENST00000412056 CCDC73Q6ZRK6 1079 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 DAW1Q8N136 415 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 SLC4A7Q9Y6M7 1214 aa15.46■□□□□ 0.07
CPNE1-206ENST00000412056 LRRIQ4A6NIV6 560 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 GRXCR1A8MXD5 290 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 GPR182O15218 404 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 EFCAB14O75071 495 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 GUCY2CP25092 1073 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 PHKA2P46019 1235 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 PTENP60484 403 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 E2F4Q16254 413 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 ARSHQ5FYA8 562 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 ODR4Q5SWX8 454 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 SRGAP1Q7Z6B7 1085 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 TMCO2Q7Z6W1 182 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-206ENST00000412056 KIFAP3Q92845 792 aa15.45■□□□□ 0.06
CPNE1-206ENST00000412056 FNDC1Q4ZHG4 1894 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-206ENST00000412056 SOX1O00570 391 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-206ENST00000412056 ATP2A2P16615 1042 aaKnown RBP15.44■□□□□ 0.06
CPNE1-206ENST00000412056 SFPQP23246 707 aaKnown RBP eCLIP15.44■□□□□ 0.068e-7■□□□□ 11.1
CPNE1-206ENST00000412056 POU5F1BQ06416 359 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 DSC3Q14574 896 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 LRIT3Q3SXY7 679 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 ADALQ6DHV7 355 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 RTN4RL1Q86UN2 441 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-206ENST00000412056 IFNLR1Q8IU57 520 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-206ENST00000412056 DHX58Q96C10 678 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 SLC9A7Q96T83 725 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 REEP2Q9BRK0 252 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 KIFC3Q9BVG8 833 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 TIPINQ9BVW5 301 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 INO80BQ9C086 356 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-206ENST00000412056 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 KCND2Q9NZV8 630 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 NLRC5Q86WI3 1866 aa15.44■□□□□ 0.06
CPNE1-206ENST00000412056 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 SFI1A8K8P3 1242 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 INO80B-WBP1J3KQ70 363 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 ENPP3O14638 875 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 AMHP03971 560 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 NAMPTP43490 491 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 MBTD1Q05BQ5 628 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 PPP2R5AQ15172 486 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 CDCA2Q69YH5 1023 aaPredicted RBP15.43■□□□□ 0.06
CPNE1-206ENST00000412056 CATSPER4Q7RTX7 472 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 MYOCDQ8IZQ8 938 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 DEPTORQ8TB45 409 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 IFT74Q96LB3 600 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 DRC1Q96MC2 740 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 ADAM2Q99965 735 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
CPNE1-206ENST00000412056 KIAA1671Q9BY89 1806 aa15.43■□□□□ 0.06
CPNE1-206ENST00000412056 COL4A6Q14031 1691 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-206ENST00000412056 A0A1B0GVL5 298 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-206ENST00000412056 DENND3A2RUS2 1198 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 MYMKA6NI61 221 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 POLR2DO15514 142 aaKnown RBP15.42■□□□□ 0.06
CPNE1-206ENST00000412056 PFKFB1P16118 471 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 CMA1P23946 247 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 RABGGTBP53611 331 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 PEX3P56589 373 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 GIT2Q14161 759 aa15.42■□□□□ 0.06
CPNE1-206ENST00000412056 FAM117BQ6P1L5 589 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms