RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 ERVK-5Q9HDB9 667 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 RCOR1Q9UKL0 485 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ODF2LQ9ULJ1 636 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 PADI3Q9ULW8 664 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ZDHHC9Q9Y397 364 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ZBBXA8MT70 800 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 H0YCG3 227 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 ZBTB39O15060 712 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 GJB5O95377 273 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 STAG3L1P0CL83 205 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 SKIP12755 728 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 PLCG1P19174 1290 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 CDC25AP30304 524 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 CD52P31358 61 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 RAB27AP51159 221 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 SLC12A3P55017 1021 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 DNM1Q05193 864 aaKnown RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 TMEM62Q0P6H9 643 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 LAMTOR4Q0VGL1 99 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 DRP2Q13474 957 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 FAM187BQ17R55 369 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 RINT1Q6NUQ1 792 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 SLC17A8Q8NDX2 589 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 RASSF8Q8NHQ8 419 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 TMEM40Q8WWA1 233 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 PRPF31Q8WWY3 499 aaKnown RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 RAD54LQ92698 747 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 ZBTB10Q96DT7 871 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 IFT74Q96LB3 600 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 PNMA5Q96PV4 448 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 SH2D3AQ9BRG2 576 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 LRRC27Q9C0I9 530 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 POLR3FQ9H1D9 316 aaPredicted RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 ELAC1Q9H777 363 aaKnown RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 AGO3Q9H9G7 860 aaKnown RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 IFT122Q9HBG6 1241 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 DACT1Q9NYF0 836 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 CXXC1Q9P0U4 656 aaPredicted RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 NOC2LQ9Y3T9 749 aaKnown RBP9.11□□□□□ -0.95
RPE-204ENST00000411934 PCDHA11Q9Y5I1 949 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 ZMYM2Q9UBW7 1377 aa9.11□□□□□ -0.95
RPE-204ENST00000411934 TTC3P53804 2025 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 PTPRSQ13332 1948 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 A0A087WZ62 844 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 E9PMD0 336 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 HOXA2O43364 376 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 PLA2G4BP0C869 781 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 ZSCAN20P17040 1043 aaPredicted RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 GLRA2P23416 452 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 ME1P48163 572 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 EFNA5P52803 228 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 HTRA4P83105 476 aaPredicted RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 CEBPZQ03701 1054 aaKnown RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 GRIN1Q05586 938 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 DMP1Q13316 513 aaPredicted RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 CAPSQ13938 189 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 DSC3Q14574 896 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 KARSQ15046 597 aaKnown RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 ADALQ6DHV7 355 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 C1orf186Q6ZWK4 172 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 SLC24A5Q71RS6 500 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 KCNK18Q7Z418 384 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 HERC6Q8IVU3 1022 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 ZBTB8OSQ8IWT0 167 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 RNF149Q8NC42 400 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 TOP1MTQ969P6 601 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 SPATA32Q96LK8 384 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 NLRP4Q96MN2 994 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 FDXACB1Q9BRP7 624 aaPredicted RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 RGS18Q9NS28 235 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 BLOC1S4Q9NUP1 217 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 AGPAT5Q9NUQ2 364 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 PRMT7Q9NVM4 692 aaPredicted RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 LARSQ9P2J5 1176 aaKnown RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 MSRAQ9UJ68 235 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 ST3GAL5Q9UNP4 418 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 GINS2Q9Y248 185 aa9.1□□□□□ -0.95
RPE-204ENST00000411934 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
RPE-204ENST00000411934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.09□□□□□ -0.95
RPE-204ENST00000411934 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 DENND3A2RUS2 1198 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 ERLIN2O94905 339 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 DNAJB2P25686 324 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 FXR1P51114 621 aaKnown RBP eCLIP9.09□□□□□ -0.95
RPE-204ENST00000411934 ZNF131P52739 623 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 NCBP1Q09161 790 aaKnown RBP9.09□□□□□ -0.95
RPE-204ENST00000411934 NFX1Q12986 1120 aaKnown RBP9.09□□□□□ -0.95
RPE-204ENST00000411934 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 FAM102BQ5T8I3 360 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 RRAGBQ5VZM2 374 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 RESP18Q5W5W9 173 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 CATSPER4Q7RTX7 472 aa9.09□□□□□ -0.95
RPE-204ENST00000411934 CRIPAKQ8N1N5 446 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms