RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CT47B1P0C2W7 299 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MTHFD2P13995 350 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZNF28P17035 718 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CCND1P24385 295 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SDHAP31040 664 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 IL13P35225 146 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KIF11P52732 1056 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PHC1P78364 1004 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 NKX3-2P78367 333 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DSG1Q02413 1049 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ITKQ08881 620 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MAP3K12Q12852 859 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PCBP1Q15365 356 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MBLAC2Q68D91 279 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FRMD7Q6ZUT3 714 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MILR1Q7Z6M3 343 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZBTB46Q86UZ6 589 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 NLRP10Q86W26 655 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 C7orf31Q8N865 590 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KIAA1958Q8N8K9 716 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SMC1BQ8NDV3 1235 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PIP4K2CQ8TBX8 421 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 RPGRQ92834 1020 aaKnown RBP3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SLC5A5Q92911 643 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FERMT2Q96AC1 680 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MTMR8Q96EF0 704 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PLEKHG4BQ96PX9 1271 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MTA3Q9BTC8 594 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MMRN2Q9H8L6 949 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 RIC8BQ9NVN3 520 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 THG1LQ9NWX6 298 aaKnown RBP3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ARHGAP28Q9P2N2 729 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZDHHC9Q9Y397 364 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SIT1Q9Y3P8 196 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 NOC2LQ9Y3T9 749 aaKnown RBP3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ASB1Q9Y576 335 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MAGI3Q5TCQ9 1506 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KIF27Q86VH2 1401 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PBRM1Q86U86 1689 aa3.43□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KIF13AQ9H1H9 1805 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SCDO00767 359 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 RAMP2O60895 175 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 C1SP09871 688 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MECP2P51608 486 aaKnown RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EPHA5P54756 1037 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 LRRC32Q14392 662 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PLEKHG6Q3KR16 790 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 HABP4Q5JVS0 413 aaKnown RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 BTBD8Q5XKL5 378 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZKSCAN2Q63HK3 967 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TCTN3Q6NUS6 607 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FAM180AQ6UWF9 173 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DPP8Q6V1X1 898 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ESPNLQ6ZVH7 1005 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PHYKPLQ8IUZ5 450 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 C1orf210Q8IVY1 113 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 UBR7Q8N806 425 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 HIPK4Q8NE63 616 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PLEKHO2Q8TD55 490 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 RSAD2Q8WXG1 361 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TOE1Q96GM8 510 aaKnown RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 AHCYL2Q96HN2 611 aaKnown RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 YTHDC1Q96MU7 727 aaKnown RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 JAM3Q9BX67 310 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PDGFDQ9GZP0 370 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EMC7Q9NPA0 242 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GEMIN8Q9NWZ8 242 aaKnown RBP3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DTLQ9NZJ0 730 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ASH2LQ9UBL3 628 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ZBTB21Q9ULJ3 1066 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CBLCQ9ULV8 474 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SYNPO2Q9UMS6 1093 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KDM5BQ9UGL1 1544 aa3.42□□□□□ -1.86
RNU6-1140P-201ENST00000410517 DISP3Q9P2K9 1392 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EPRSP07814 1512 aaKnown RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 UBA6A0AVT1 1052 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SHTN1A0MZ66 631 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GOLGA6CA6NDK9 693 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GOLGA6BA6NDN3 693 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FOXP2O15409 715 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TADA3O75528 432 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FBXO21O94952 628 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SNUPNO95149 360 aaKnown RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EYA4O95677 639 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 GOLGA6DP0CG33 693 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PTPN1P18031 435 aaKnown RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FBLP22087 321 aaKnown RBP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ADCYAP1R1P41586 468 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 KRT85P78386 507 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 ROM1Q03395 351 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TUSC3Q13454 348 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 HLTFQ14527 1009 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TMEM132BQ14DG7 1078 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 EPHA7Q15375 998 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 TTC38Q5R3I4 469 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SYDE2Q5VT97 1194 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 VASNQ6EMK4 673 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PCSK4Q6UW60 755 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 RASSF3Q86WH2 238 aa3.41□□□□□ -1.86
RNU6-1140P-201ENST00000410517 PTRH1Q86Y79 214 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms