RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MAEAQ7L5Y9 396 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 MAP4K3Q8IVH8 894 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 RETREG2Q8NC44 543 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ATP8B4Q8TF62 1192 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 IQCDQ96DY2 449 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC51Q96ER9 411 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ACCSQ96QU6 501 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 GBP3Q9H0R5 595 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ARHGAP28Q9P2N2 729 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 KCNG1Q9UIX4 513 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 GJD2Q9UKL4 321 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ABT1Q9ULW3 272 aaKnown RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ADGRA3Q8IWK6 1321 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 AKR1B15C9JRZ8 316 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 NOP56O00567 594 aaKnown RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 GAS2O43903 313 aaKnown RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 SKILP12757 684 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ADCYAP1R1P41586 468 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 PEX3P56589 373 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ACVR2BQ13705 512 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 PLCB4Q15147 1175 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 IQSEC1Q6DN90 963 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 CNGA4Q8IV77 575 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 KSR1Q8IVT5 923 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 SOCS4Q8WXH5 440 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 POLR3FQ9H1D9 316 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 SMARCAD1Q9H4L7 1026 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 AZI2Q9H6S1 392 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 METTL14Q9HCE5 456 aaKnown RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 H0YCG3 227 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 MAPK13O15264 365 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SLC16A4O15374 487 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 AKAP3O75969 853 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 FXR1P51114 621 aaKnown RBP eCLIP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SMTNP53814 917 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 POLGP54098 1239 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 TBC1D8BQ0IIM8 1120 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC40Q4G0X9 1142 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 HS2ST1Q7LGA3 356 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 EXOC8Q8IYI6 725 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 REM2Q8IYK8 340 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ZIC5Q96T25 663 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 APBA2Q99767 749 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 NUP58Q9BVL2 599 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 FLRT1Q9NZU1 646 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CAPN11Q9UMQ6 739 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 TBX20Q9UMR3 447 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 COL1A2P08123 1366 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 RNF225M0QZC1 329 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ADCY6O43306 1168 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 STX10O60499 249 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ALDH1A1P00352 501 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SMPD1P17405 629 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CTGFP29279 349 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CASP14P31944 242 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 NAMPTP43490 491 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SOX10P56693 466 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SYCP1Q15431 976 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 FKBP15Q5T1M5 1219 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 TAS1R3Q7RTX0 852 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 PPFIBP1Q86W92 1011 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 TRIM50Q86XT4 487 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SLC7A3Q8WY07 619 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 DNAJC7Q99615 494 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 NAA15Q9BXJ9 866 aaKnown RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CFHR5Q9BXR6 569 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 KMT5AQ9NQR1 393 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 RALGAPA2Q2PPJ7 1873 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CLIC2O15247 247 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 HBP1O60381 514 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 PIGRP01833 764 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 LGALS2P05162 132 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 EPB41P11171 864 aaKnown RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 GLRA2P23416 452 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 PSMC2P35998 433 aaKnown RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 RGS2P41220 211 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CASP4P49662 377 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ADKP55263 362 aaKnown RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 GOLGA8FQ08AF8 430 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 GOLGA8DPQ0D2H9 430 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 KCNMA1Q12791 1236 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 PPP2R5AQ15172 486 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 CREBRFQ8IUR6 639 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ASAP3Q8TDY4 903 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 SLC35C1Q96A29 364 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 IFT74Q96LB3 600 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 C16orf70Q9BSU1 422 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ABHD10Q9NUJ1 306 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ERAP1Q9NZ08 941 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 ARMCX3Q9UH62 379 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 EXOC7Q9UPT5 735 aa6.05□□□□□ -1.44
EPHA4-202ENST00000409854 GNEQ9Y223 722 aaKnown RBP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.05□□□□□ -1.44
EPHA4-202ENST00000409854 TTC26A0AVF1 554 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 DENND3A2RUS2 1198 aa6.04□□□□□ -1.44
EPHA4-202ENST00000409854 ARHGAP6O43182 974 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms