RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 KSR1Q8IVT5 923 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 DEFB123Q8N688 67 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 KIFAP3Q92845 792 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 YME1L1Q96TA2 773 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 CCSER1Q9C0I3 900 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 NKX2-4Q9H2Z4 354 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 RGS18Q9NS28 235 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 LRFN2Q9ULH4 789 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 FNDC1Q4ZHG4 1894 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-205ENST00000409810 E9PMD0 336 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 SPTLC2O15270 562 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 PPP6R2O75170 966 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 ERLIN2O94905 339 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 UPP2O95045 317 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 BRD1O95696 1058 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 CA3P07451 260 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 GLRA2P23416 452 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 SARSP49591 514 aaKnown RBP12.09□□□□□ -0.47
CHMP3-205ENST00000409810 PTENP60484 403 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
CHMP3-205ENST00000409810 GRB10Q13322 594 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 PKP1Q13835 747 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 TMEM119Q4V9L6 283 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 FAM117BQ6P1L5 589 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 SLC24A5Q71RS6 500 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 ZBTB8OSQ8IWT0 167 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 KCNG4Q8TDN1 519 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 PNMA5Q96PV4 448 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 ADAM2Q99965 735 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 NFKBIZQ9BYH8 718 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 TMX1Q9H3N1 280 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 ZNF576Q9H609 170 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 IFT122Q9HBG6 1241 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 KCND2Q9NZV8 630 aa12.09□□□□□ -0.47
CHMP3-205ENST00000409810 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-205ENST00000409810 FBXO2Q9UK22 296 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-205ENST00000409810 YBX2Q9Y2T7 364 aaKnown RBP12.09□□□□□ -0.47
CHMP3-205ENST00000409810 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 SKIP12755 728 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 MYOGP15173 224 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 NAMPTP43490 491 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 HTRA4P83105 476 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 GRIN1Q05586 938 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 CAPSQ13938 189 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 FOXD4L6Q3SYB3 417 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 FOXD4L3Q6VB84 417 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 ASAP3Q8TDY4 903 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 LINC01599Q8WXQ3 324 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 DRC1Q96MC2 740 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 PLIN2Q99541 437 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 C2orf40Q9H1Z8 148 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 GPRC5CQ9NQ84 441 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 KCNG1Q9UIX4 513 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 PIN4Q9Y237 131 aaKnown RBP12.08□□□□□ -0.48
CHMP3-205ENST00000409810 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
CHMP3-205ENST00000409810 INO80B-WBP1J3KQ70 363 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 HOXA2O43364 376 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 MGEA5O60502 916 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 CSDE1O75534 798 aaKnown RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 PLA2G4BP0C869 781 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 PLCG1P19174 1290 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 FGFR4P22455 802 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 GUCY2CP25092 1073 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 AXLP30530 894 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 ANP32AP39687 249 aaKnown RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 RAB27AP51159 221 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 KRT85P78386 507 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 NUCB2P80303 420 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 DMP1Q13316 513 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 DSC3Q14574 896 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 KARSQ15046 597 aaKnown RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 TWF2Q6IBS0 349 aaKnown RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 RINT1Q6NUQ1 792 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 KCNK18Q7Z418 384 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 RTN4RL1Q86UN2 441 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 DEPTORQ8TB45 409 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 LARP4BQ92615 738 aaKnown RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 RAD54LQ92698 747 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 EPSTI1Q96J88 318 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 TTYH1Q9H313 450 aaPredicted RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 ELAC1Q9H777 363 aaKnown RBP12.07□□□□□ -0.48
CHMP3-205ENST00000409810 C17orf75Q9HAS0 396 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 AGPAT5Q9NUQ2 364 aa12.07□□□□□ -0.48
CHMP3-205ENST00000409810 TFIP11Q9UBB9 837 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms