RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CEP63Q96MT8 703 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 ACCSQ96QU6 501 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 TUT1Q9H6E5 874 aaKnown RBP13.68□□□□□ -0.22
CHMP3-204ENST00000409727 AGPAT3Q9NRZ7 376 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 LGALS16A8MUM7 142 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 MAFO75444 373 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 INSRRP14616 1297 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 RPL13P26373 211 aaKnown RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 MAP2K2P36507 400 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 CASP4P49662 377 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 GTF2BQ00403 316 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 BEX3Q00994 111 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 LRMPQ12912 555 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 ALCAMQ13740 583 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 MIIPQ5JXC2 388 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 MFSD14CQ5VZR4 134 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 FOXR2Q6PJQ5 311 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 TRPV1Q8NER1 839 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 KCNF1Q9H3M0 494 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 C17orf75Q9HAS0 396 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 IMPACTQ9P2X3 320 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 TBX20Q9UMR3 447 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 ELNP15502 786 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 ARL2P36404 184 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 HS1BP3Q53T59 392 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 CPLX3Q8WVH0 158 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 SPIRE2Q8WWL2 714 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 ZNF668Q96K58 619 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-204ENST00000409727 TMEM206Q9H813 350 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 USP20Q9Y2K6 914 aa13.67□□□□□ -0.22
CHMP3-204ENST00000409727 AKAP3O75969 853 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 IGHA2P01877 340 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 GJB1P08034 283 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 CLCN3P51790 818 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 RTP1P59025 263 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
CHMP3-204ENST00000409727 RDH13Q8NBN7 331 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
CHMP3-204ENST00000409727 BICD1Q96G01 975 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 NTPCRQ9BSD7 190 aaKnown RBP13.66□□□□□ -0.22
CHMP3-204ENST00000409727 AP5M1Q9H0R1 490 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 ST6GALNAC4Q9H4F1 302 aa13.66□□□□□ -0.22
CHMP3-204ENST00000409727 GNA14O95837 355 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 MYL3P08590 195 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 AKR1A1P14550 325 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 CAPSQ13938 189 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 EFCAB12Q6NXP0 572 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 RHPN2Q8IUC4 686 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PPP1R16BQ96T49 567 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 CBWD1Q9BRT8 395 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 NDST4Q9H3R1 872 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 EXOC7Q9UPT5 735 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 A6NJR5 290 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 ANKRD63C9JTQ0 380 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 GPR25O00155 361 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 EXOC3O60645 756 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 EPB41P11171 864 aaKnown RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 CYBAP13498 195 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 KLRC1P26715 233 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PBX1P40424 430 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 NAMPTP43490 491 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 KLK7P49862 253 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 DNM2P50570 870 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 GSDMDP57764 484 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PPP2R5AQ15172 486 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 DCAF17Q5H9S7 520 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 FKBP15Q5T1M5 1219 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 LRRC8AQ8IWT6 810 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 ARHGAP28Q9P2N2 729 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 SUCLA2Q9P2R7 463 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
CHMP3-204ENST00000409727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHMP3-204ENST00000409727 HNRNPDLO14979 420 aaKnown RBP13.64□□□□□ -0.23
CHMP3-204ENST00000409727 C22orf31O95567 290 aa13.64□□□□□ -0.23
CHMP3-204ENST00000409727 C6orf222P0C671 652 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-204ENST00000409727 HOXD8P13378 290 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-204ENST00000409727 SFPQP23246 707 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP3-204ENST00000409727 CPT1AP50416 773 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms