RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KBTBD13C9JR72 458 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 ACTN2P35609 894 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 FXR2P51116 673 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNX13-202ENST00000409604 ACVR2BQ13705 512 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 CDO1Q16878 200 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 BSPRYQ5W0U4 402 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 DNAJB3Q8WWF6 145 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 MRFAP1L1Q96HT8 127 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 POLR3GO15318 223 aaPredicted RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 IFNB1P01574 187 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 SLC9A1P19634 815 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 VAMP7P51809 220 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 SP3Q02447 781 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 PSMD2Q13200 908 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 SPRYD7Q5W111 196 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 SCN4BQ8IWT1 228 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 DAGLBQ8NCG7 672 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 NOX5Q96PH1 765 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 TUBE1Q9UJT0 475 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 NUP98P52948 1817 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 KIF2AO00139 706 aaPredicted RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 LRRC63Q05C16 580 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 C2CD6Q53TS8 623 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 VSIG10LQ86VR7 867 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 GUF1Q8N442 669 aaKnown RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 GPRASP2Q96D09 838 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 ATF7P17544 494 aaPredicted RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 PMS1P54277 932 aaKnown RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 PLCB4Q15147 1175 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 TYW1Q9NV66 732 aaKnown RBP12.35□□□□□ -0.43
SNX13-202ENST00000409604 HSPBP1Q9NZL4 362 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 PPP2R2CQ9Y2T4 447 aa12.35□□□□□ -0.43
SNX13-202ENST00000409604 KDM3BQ7LBC6 1761 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 ARFGEF2Q9Y6D5 1785 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 GOLGA6L9A6NEM1 432 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 FTCDO95954 541 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
SNX13-202ENST00000409604 ADSSL1Q8N142 457 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 ZBTB45Q96K62 511 aaPredicted RBP12.34□□□□□ -0.43
SNX13-202ENST00000409604 TINF2Q9BSI4 451 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 FSD2A1L4K1 749 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 C2CD2LO14523 706 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 TBX3O15119 743 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 RPS6KA5O75582 802 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 FGRP09769 529 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
SNX13-202ENST00000409604 IQCEQ6IPM2 695 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 AGPAT5Q9NUQ2 364 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
SNX13-202ENST00000409604 H2AFZP0C0S5 128 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 WEE2P0C1S8 567 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 P4HA1P13674 534 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 CACNB2Q08289 660 aaPredicted RBP12.34□□□□□ -0.43
SNX13-202ENST00000409604 NOGQ13253 232 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 TRIM14Q14142 442 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 H2AFVQ71UI9 128 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 TEPSINQ96N21 525 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 MYO6Q9UM54 1294 aa12.34□□□□□ -0.43
SNX13-202ENST00000409604 KCNK3O14649 394 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 ADCY3O60266 1144 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 NPTX2P47972 431 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 IFFO1Q0D2I5 559 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 CCL14Q16627 93 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 ZNF667Q5HYK9 610 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 LIN9Q5TKA1 542 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 TMCO3Q6UWJ1 677 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
SNX13-202ENST00000409604 SNX9Q9Y5X1 595 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 CRYBG1Q9Y4K1 1723 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 ITGB4P16144 1822 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 MYL1P05976 194 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 GHRP10912 638 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 RARRES1P49788 294 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 MFAP3P55082 362 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 ECM1Q16610 540 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 ZNF699Q32M78 642 aa12.33□□□□□ -0.44
SNX13-202ENST00000409604 NAALADL2Q58DX5 795 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms