RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CLLU1OSQ5K130 101 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 TMC7Q7Z402 723 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 ECHDC2Q86YB7 292 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 C12orf76Q8N812 135 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 NECAB1Q8N987 351 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 TRIM44Q96DX7 344 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 ADAMTS10Q9H324 1103 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 NGRNQ9NPE2 291 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 PUF60Q9UHX1 559 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 HCFC2Q9Y5Z7 792 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 DCHS1Q96JQ0 3298 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 PTPRZ1P23471 2315 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 SPTBN4Q9H254 2564 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 IGLV3-22A0A075B6J6 115 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 NT5C1B-RDH14C9J2C7 533 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 CLASP2O75122 1294 aaKnown RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 GADD45BO75293 160 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 LETM1O95202 739 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 HOXB8P17481 243 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 FGFR4P22455 802 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 CLCN1P35523 988 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 ADCY7P51828 1080 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 ODR4Q5SWX8 454 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 CCDC183Q5T5S1 534 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 PLA2G4DQ86XP0 818 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 METTL13Q8N6R0 699 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 MRPL43Q8N983 215 aaKnown RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 CASP10Q92851 521 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 ADAM7Q9H2U9 754 aa14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 V9GY48 417 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-205ENST00000409542 SRGAP2BP0DMP2 458 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF76P36508 570 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 NLRP11P59045 1033 aaKnown RBP14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 JAKMIP3Q5VZ66 844 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 MIS18BP1Q6P0N0 1132 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 NIPA1Q7RTP0 329 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 SLC39A11Q8N1S5 342 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 LRRC71Q8N4P6 559 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 LINC01465Q8N7H1 131 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 RNF169Q8NCN4 708 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 CRYGNQ8WXF5 182 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 TCEANC2Q96MN5 208 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 SPG21Q9NZD8 308 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 SORCS3Q9UPU3 1222 aa14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 MYH9P35579 1960 aaKnown RBP14.29□□□□□ -0.12
CHRNA1-205ENST00000409542 PRR23AA6NEV1 266 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 ESPNB1AK53 854 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 METAP2P50579 478 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 KRT17Q04695 432 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 HS1BP3Q53T59 392 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 RARS2Q5T160 578 aaKnown RBP14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 APOA5Q6Q788 366 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 CKAP2LQ8IYA6 745 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 LRRC43Q8N309 656 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 HELQQ8TDG4 1101 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 IRF2BPLQ9H1B7 796 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 BARHL2Q9NY43 387 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 LIMD1Q9UGP4 676 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 NR2E1Q9Y466 385 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 WDR81Q562E7 1941 aa14.28□□□□□ -0.12
CHRNA1-205ENST00000409542 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 IPO5O00410 1097 aaKnown RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 CSDE1O75534 798 aaKnown RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 CXCL14O95715 111 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 CDC27P30260 824 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 NBL1P41271 181 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 AP3B2Q13367 1082 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 SMC1AQ14683 1233 aaKnown RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 EFCAB12Q6NXP0 572 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 PPP1R18Q6NYC8 613 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 FAM43BQ6ZT52 329 aaPredicted RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 TMEM173Q86WV6 379 aaPredicted RBP14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 UBALD2Q8IYN6 164 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF577Q9BSK1 485 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 GABBR1Q9UBS5 961 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 AKT3Q9Y243 479 aa14.27□□□□□ -0.12
CHRNA1-205ENST00000409542 RIF1Q5UIP0 2472 aaKnown RBP14.26□□□□□ -0.13
CHRNA1-205ENST00000409542 EDIL3O43854 480 aa14.26□□□□□ -0.13
CHRNA1-205ENST00000409542 ZNF862O60290 1169 aa14.26□□□□□ -0.13
CHRNA1-205ENST00000409542 CYP3A4P08684 503 aa14.26□□□□□ -0.13
CHRNA1-205ENST00000409542 EPCAMP16422 314 aa14.26□□□□□ -0.13
CHRNA1-205ENST00000409542 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
CHRNA1-205ENST00000409542 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms