RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 USP49Q70CQ1 688 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 SRGAP1Q7Z6B7 1085 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 RTN4RL1Q86UN2 441 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 RASSF8Q8NHQ8 419 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 KCNG4Q8TDN1 519 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 LINC01599Q8WXQ3 324 aa22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 SYMPKQ92797 1274 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-207ENST00000409417 GJB5O95377 273 aa22.02■■□□□ 1.12
PDLIM2-207ENST00000409417 GLRA2P23416 452 aa22.02■■□□□ 1.12
PDLIM2-207ENST00000409417 PHKA2P46019 1235 aa22.02■■□□□ 1.12
PDLIM2-207ENST00000409417 KARSQ15046 597 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-207ENST00000409417 TMCO2Q7Z6W1 182 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-207ENST00000409417 TOP1MTQ969P6 601 aa22.02■■□□□ 1.12
PDLIM2-207ENST00000409417 MICAL3Q7RTP6 2002 aa22.02■■□□□ 1.11
PDLIM2-207ENST00000409417 DENND3A2RUS2 1198 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 PLA2G4BP0C869 781 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 PLCG1P19174 1290 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 TXLNAP40222 546 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 PTENP60484 403 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 NUCB2P80303 420 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 RINT1Q6NUQ1 792 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 C1orf186Q6ZWK4 172 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 SYT2Q8N9I0 419 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 ADAM2Q99965 735 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 ZBED2Q9BTP6 218 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 RUSC1Q9BVN2 902 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 RCOR1Q9UKL0 485 aa22.01■■□□□ 1.11
PDLIM2-207ENST00000409417 TLL1O43897 1013 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 MGEA5O60502 916 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 ANP32AP39687 249 aaKnown RBP22■■□□□ 1.11
PDLIM2-207ENST00000409417 SLC12A3P55017 1021 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 CAPSQ13938 189 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 DSC3Q14574 896 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 IFNLR1Q8IU57 520 aaPredicted RBP22■■□□□ 1.11
PDLIM2-207ENST00000409417 KIFAP3Q92845 792 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 TIFAQ96CG3 184 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 NFKBIZQ9BYH8 718 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 MINDY3Q9H8M7 445 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 RGS18Q9NS28 235 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 KCND2Q9NZV8 630 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 CCDC39Q9UFE4 941 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 YBX2Q9Y2T7 364 aaKnown RBP22■■□□□ 1.11
PDLIM2-207ENST00000409417 MYH15Q9Y2K3 1946 aa22■■□□□ 1.11
PDLIM2-207ENST00000409417 TMEM265A0A087WTH1 108 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 CUTAO60888 179 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 SSBP05455 408 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 FGFR4P22455 802 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 PCBP1Q15365 356 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 SLC24A5Q71RS6 500 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 LRRC15Q8TF66 581 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 RAD9AQ99638 391 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 TIPINQ9BVW5 301 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 CHST12Q9NRB3 414 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 C1orf112Q9NSG2 853 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 BLOC1S4Q9NUP1 217 aa21.99■■□□□ 1.11
PDLIM2-207ENST00000409417 CHD9Q3L8U1 2897 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 TTC3P53804 2025 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 MYOGP15173 224 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 ZSCAN20P17040 1043 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 GUCY2CP25092 1073 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 KRT85P78386 507 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 AXDND1Q5T1B0 1012 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 FAM117BQ6P1L5 589 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 CATSPER4Q7RTX7 472 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 CRIPAKQ8N1N5 446 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 RAD54LQ92698 747 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 INSL6Q9Y581 213 aa21.98■■□□□ 1.11
PDLIM2-207ENST00000409417 C9IYK1 514 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 UPP2O95045 317 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 ME1P48163 572 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 HTRA4P83105 476 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 PPP2R5AQ15172 486 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 BSNDQ8WZ55 320 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 DRC1Q96MC2 740 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 DACT1Q9NYF0 836 aa21.97■■□□□ 1.11
PDLIM2-207ENST00000409417 LRRIQ4A6NIV6 560 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 HIP1RO75146 1068 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 NCLP19338 710 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 NAMPTP43490 491 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 SARSP49591 514 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 FAM189BP81408 668 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 MBTD1Q05BQ5 628 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 ZNF697Q5TEC3 545 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 RRAGBQ5VZM2 374 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 CDCA2Q69YH5 1023 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 CCDC73Q6ZRK6 1079 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 NPAS4Q8IUM7 802 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 LARP4BQ92615 738 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 IFT74Q96LB3 600 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 NKX2-4Q9H2Z4 354 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 SLC28A3Q9HAS3 691 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 POLD4Q9HCU8 107 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 RNF216Q9NWF9 866 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 STK17AQ9UEE5 414 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 PCDHA7Q9UN72 937 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 INO80B-WBP1J3KQ70 363 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 CA3P07451 260 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 STAG3L1P0CL83 205 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 MAPK7Q13164 816 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 DAW1Q8N136 415 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms