RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TEX2Q8IWB9 1127 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 VPS39Q96JC1 886 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 MTMR4Q9NYA4 1195 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 KLHL8Q9P2G9 620 aaPredicted RBP26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 SUN1O94901 812 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 SLC12A1Q13621 1099 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 CPB1P15086 417 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 SDC4P31431 198 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 TTC13Q8NBP0 860 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 FAM217BQ9NTX9 383 aaPredicted RBP26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 GGA3Q9NZ52 723 aa26.82■■□□□ 1.88
SPIRE1-202ENST00000409402 TRIM49BA6NDI0 452 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 ATXN8OSP0DMR3 200 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 STAG2Q8N3U4 1231 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 KATNAL1Q9BW62 490 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 NVLO15381 856 aaKnown RBP26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 GPC5P78333 572 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 KCTD16Q68DU8 428 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 TUFT1Q9NNX1 390 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 LGALS16A8MUM7 142 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 KRT39Q6A163 491 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 CYFIP1Q7L576 1253 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 PYROXD1Q8WU10 500 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 KIF12Q96FN5 646 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 IFNAR2P48551 515 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 VEPH1Q14D04 833 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 IFT43Q96FT9 208 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 ACAP3Q96P50 834 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 MTIF3Q9H2K0 278 aaKnown RBP26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 POLD4Q9HCU8 107 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 RBAKQ9NYW8 714 aaPredicted RBP26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 MOSPD1Q9UJG1 213 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 SPATA31A5Q5VU36 1347 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 SPATA31A7Q8IWB4 1347 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 EXOC1LA0A1B0GW35 172 aa26.81■■□□□ 1.88
SPIRE1-202ENST00000409402 CDC42EP5Q6NZY7 148 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 PSMD14O00487 310 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 BAG2O95816 211 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 ADCY1Q08828 1119 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 ZBTB12Q9Y330 459 aaPredicted RBP26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 A8MXQ7 604 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 MIF4GDA9UHW6 222 aaKnown RBP26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 PRCPP42785 496 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 FSD1LQ9BXM9 530 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 AGO2Q9UKV8 859 aaKnown RBP26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 SRRM1Q8IYB3 904 aaKnown RBP26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 SAAL1Q96ER3 474 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 AP1M1Q9BXS5 423 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 NYAP2Q9P242 653 aa26.8■■□□□ 1.88
SPIRE1-202ENST00000409402 HIP1RO75146 1068 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 YWHABP31946 246 aaKnown RBP26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 NAALADL2Q58DX5 795 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 MIPOL1Q8TD10 442 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 INTS2Q9H0H0 1204 aaKnown RBP26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 ARHGEF40Q8TER5 1519 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 RPS12P25398 132 aaKnown RBP26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 FAM151AQ8WW52 585 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 FIS1Q9Y3D6 152 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 NEMP1O14524 444 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 SBK1Q52WX2 424 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 ATP1A3P13637 1013 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 GNA15P30679 374 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 BCAS4Q8TDM0 211 aa26.79■■□□□ 1.88
SPIRE1-202ENST00000409402 IQANK1A0A1B0GTG1 560 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 TOM1L1O75674 476 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 CHEK2O96017 543 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 ADORA2BP29275 332 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 PAPOLAP51003 745 aaKnown RBP26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 RNF149Q8NC42 400 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 C11orf70Q9BRQ4 267 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 GINM1Q9NU53 330 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 ZMYND10O75800 440 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 ZRANB2O95218 330 aaKnown RBP eCLIP26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 GMPSP49915 693 aaPredicted RBP26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 ZNF543Q08ER8 600 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 MUM1Q2TAK8 710 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 TRIM62Q9BVG3 475 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 TIPINQ9BVW5 301 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 LRRC7Q96NW7 1537 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 PNPLA6Q8IY17 1366 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 EYA4O95677 639 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 KCNJ6P48051 423 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 SLC16A10Q8TF71 515 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 PDE11AQ9HCR9 933 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 FARP1Q9Y4F1 1045 aaPredicted RBP26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 CASP1P29466 404 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 SKIV2LQ15477 1246 aaKnown RBP26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 GAS2L3Q86XJ1 694 aa26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 PIN4Q9Y237 131 aaKnown RBP26.78■■□□□ 1.88
SPIRE1-202ENST00000409402 FGGP02679 453 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 ENOSF1Q7L5Y1 443 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 MMTAG2Q9BU76 263 aaKnown RBP26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 CNTNAP4Q9C0A0 1308 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 BAATQ14032 418 aaPredicted RBP26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 DUOXA2Q1HG44 320 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 PPME1Q9Y570 386 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 HAUS6Q7Z4H7 955 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 Q9H521 79 aa26.77■■□□□ 1.88
SPIRE1-202ENST00000409402 SUCLA2Q9P2R7 463 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms