RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 USP37Q86T82 979 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 MAP4K3Q8IVH8 894 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 TMEM161BQ8NDZ6 487 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 CEP89Q96ST8 783 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 KCNF1Q9H3M0 494 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 ZNF215Q9UL58 517 aaPredicted RBP11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 TBX20Q9UMR3 447 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 LUC7L2Q9Y383 392 aaKnown RBP11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 PMM2O15305 246 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 P4HA2O15460 535 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 GARTP22102 1010 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 FCGRTP55899 365 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 ZBED6P86452 979 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 CCZ1BP86790 482 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 CCZ1P86791 482 aaPredicted RBP11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 SMYD5Q6GMV2 418 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 SLFN12LQ6IEE8 588 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 TC2NQ8N9U0 490 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 VTI1AQ96AJ9 217 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 APBA2Q99767 749 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 BAG1Q99933 345 aaPredicted RBP11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 XPNPEP1Q9NQW7 623 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 SPTLC3Q9NUV7 552 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 ARHGAP28Q9P2N2 729 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 GJD2Q9UKL4 321 aa11.31□□□□□ -0.6
SNORD88C-201ENST00000408061 ZMYM2Q9UBW7 1377 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 GOLGA6L9A6NEM1 432 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 RRN3P2A6NIE6 340 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 CCDC169A6NNP5 214 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 TNPO2O14787 897 aaKnown RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 SLC16A4O15374 487 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 KPNA6O60684 536 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 MFAP3LO75121 409 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 PIGRP01833 764 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 IGHA2P01877 340 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 AFPP02771 609 aaKnown RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 KRT13P13646 458 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 TRIM21P19474 475 aaKnown RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 MAP2K2P36507 400 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 CDK17Q00537 523 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 RBL2Q08999 1139 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 STRN3Q13033 797 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 CRHR2Q13324 411 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 TFDP1Q14186 410 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 NOLC1Q14978 699 aaKnown RBP eCLIP11.3□□□□□ -0.61e-323■□□□□ 11
SNORD88C-201ENST00000408061 PLCB4Q15147 1175 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 SYCP1Q15431 976 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 DGKDQ16760 1214 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 NPLOC4Q8TAT6 608 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 BORCS6Q96GS4 357 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 ZNF830Q96NB3 372 aaPredicted RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 PLCB1Q9NQ66 1216 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 PDGFCQ9NRA1 345 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 FBXL5Q9UKA1 691 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 MYO6Q9UM54 1294 aa11.3□□□□□ -0.6
SNORD88C-201ENST00000408061 MGAMO43451 1857 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 A6NJR5 290 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 K7ERI5 159 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 EXOC3O60645 756 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 AKAP3O75969 853 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 GNRH1P01148 92 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 GYPCP04921 128 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 TMOD1P28289 359 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 CNGA1P29973 690 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 HNRNPH3P31942 346 aaKnown RBP11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 CASP14P31944 242 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 KRT9P35527 623 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 CETN1Q12798 172 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 KIF22Q14807 665 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 CYP26C1Q6V0L0 522 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 NEK11Q8NG66 645 aa11.29□□□□□ -0.6
SNORD88C-201ENST00000408061 DEPTORQ8TB45 409 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms