RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CLASP2O75122 1294 aaKnown RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 GPR32O75388 356 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 RPS6KA5O75582 802 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 ATG7O95352 703 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 WEE2P0C1S8 567 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 IBSPP21815 317 aaPredicted RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 NFX1Q12986 1120 aaKnown RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 ITGB3BPQ13352 177 aaPredicted RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 MTMR1Q13613 665 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 SPOUT1Q5T280 376 aaKnown RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 TMTC3Q6ZXV5 915 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 SLC24A5Q71RS6 500 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 ZBTB33Q86T24 672 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 FAM228AQ86W67 206 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 ZDHHC14Q8IZN3 488 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 MRPL43Q8N983 215 aaKnown RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 SMARCC2Q8TAQ2 1214 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 RMDN1Q96DB5 314 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 ZNF274Q96GC6 653 aaPredicted RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 CDHR1Q96JP9 859 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 SPZ1Q9BXG8 430 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 AGXT2Q9BYV1 514 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 NGRNQ9NPE2 291 aaKnown RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 JADE2Q9NQC1 790 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 KCNH7Q9NS40 1196 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 FAM217BQ9NTX9 383 aaPredicted RBP7.04□□□□□ -1.28
RPA3-204ENST00000406109 HCFC2Q9Y5Z7 792 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 DENND4AQ7Z401 1863 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 F5P12259 2224 aa7.04□□□□□ -1.28
RPA3-204ENST00000406109 DENND3A2RUS2 1198 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 M0QZ92 97 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 MAFGO15525 162 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 LAG3P18627 525 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 AOC1P19801 751 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 ATP4AP20648 1035 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 KLRC1P26715 233 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 STAT5BP51692 787 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 RCAN1P53805 252 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 AK2P54819 239 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 EVCP57679 992 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 ACTR2P61160 394 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 AKAP17AQ02040 695 aaKnown RBP7.03□□□□□ -1.28
RPA3-204ENST00000406109 ITIH3Q06033 890 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 ANKRD1Q15327 319 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 UBE2SQ16763 222 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 CLLU1OSQ5K130 101 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 MCTP2Q6DN12 878 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 FAM43BQ6ZT52 329 aaPredicted RBP7.03□□□□□ -1.28
RPA3-204ENST00000406109 HEATR3Q7Z4Q2 680 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 C12orf76Q8N812 135 aaPredicted RBP7.03□□□□□ -1.28
RPA3-204ENST00000406109 CUL5Q93034 780 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 PHKBQ93100 1093 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 NECTIN4Q96NY8 510 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 MFRPQ9BY79 579 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 SLKQ9H2G2 1235 aaPredicted RBP7.03□□□□□ -1.28
RPA3-204ENST00000406109 ELAC1Q9H777 363 aaKnown RBP7.03□□□□□ -1.28
RPA3-204ENST00000406109 PSTPIP2Q9H939 334 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 ENTPD7Q9NQZ7 604 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 C1orf112Q9NSG2 853 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 TMEM161AQ9NX61 479 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 SLC9A2Q9UBY0 812 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 TPCN1Q9ULQ1 816 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 GINS2Q9Y248 185 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 STK24Q9Y6E0 443 aa7.03□□□□□ -1.28
RPA3-204ENST00000406109 NFASCO94856 1347 aa7.02□□□□□ -1.28
RPA3-204ENST00000406109 FAM208BQ5VWN6 2430 aa7.02□□□□□ -1.28
RPA3-204ENST00000406109 CPLX1O14810 134 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 GPR182O15218 404 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
RPA3-204ENST00000406109 CCNE2O96020 404 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 SRGAP2BP0DMP2 458 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 SSRP1Q08945 709 aaKnown RBP7.02□□□□□ -1.29
RPA3-204ENST00000406109 FUT2Q10981 343 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 ANGPT1Q15389 498 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 KIZQ2M2Z5 673 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 TPRNQ4KMQ1 711 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 CES5AQ6NT32 575 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 CPLX2Q6PUV4 134 aaKnown RBP7.02□□□□□ -1.29
RPA3-204ENST00000406109 ABHD15Q6UXT9 468 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 TMC7Q7Z402 723 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 ZNF598Q86UK7 904 aaKnown RBP7.02□□□□□ -1.29
RPA3-204ENST00000406109 TMEM173Q86WV6 379 aaPredicted RBP7.02□□□□□ -1.29
RPA3-204ENST00000406109 CCDC105Q8IYK2 499 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 SLC39A11Q8N1S5 342 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 CASP10Q92851 521 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 OSMRQ99650 979 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 MXRA8Q9BRK3 442 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 SLC26A6Q9BXS9 759 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 TMEM117Q9H0C3 514 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 AZI2Q9H6S1 392 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 ATP6V0A4Q9HBG4 840 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 PUF60Q9UHX1 559 aaKnown RBP7.02□□□□□ -1.29
RPA3-204ENST00000406109 PCDHA6Q9UN73 950 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 USTQ9Y2C2 406 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 PCDHA8Q9Y5H6 950 aa7.02□□□□□ -1.29
RPA3-204ENST00000406109 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
RPA3-204ENST00000406109 MEIS1O00470 390 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms