RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 COL1A2P08123 1366 aa11.76□□□□□ -0.53
RPAIN-204ENST00000405578 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 MAGEB2O15479 319 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 EFCAB14O75071 495 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 IGBP1P78318 339 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 UGCGQ16739 394 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 EPC2Q52LR7 807 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 TAF2Q6P1X5 1199 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
RPAIN-204ENST00000405578 RPAINQ86UA6 219 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 RSPH3Q86UC2 560 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 POP1Q99575 1024 aaKnown RBP11.75□□□□□ -0.53
RPAIN-204ENST00000405578 PYM1Q9BRP8 204 aaKnown RBP11.75□□□□□ -0.53
RPAIN-204ENST00000405578 NSUN3Q9H649 340 aaKnown RBP11.75□□□□□ -0.53
RPAIN-204ENST00000405578 ANKEF1Q9NU02 776 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 SETD4Q9NVD3 440 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 FAM13BQ9NYF5 915 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 INSL6Q9Y581 213 aa11.75□□□□□ -0.53
RPAIN-204ENST00000405578 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
RPAIN-204ENST00000405578 TMEM221A6NGB7 291 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 M0R296 226 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 ZNF862O60290 1169 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 MED24O75448 989 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 PARNO95453 639 aaKnown RBP11.74□□□□□ -0.53
RPAIN-204ENST00000405578 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 CKBP12277 381 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 TMOD1P28289 359 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 DNM2P50570 870 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 RBL2Q08999 1139 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 GPM6BQ13491 265 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 IKBKEQ14164 716 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 XKR9Q5GH70 373 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 BMP8AQ7Z5Y6 402 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
RPAIN-204ENST00000405578 MYOCDQ8IZQ8 938 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
RPAIN-204ENST00000405578 LMBR1Q8WVP7 490 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 SLC7A3Q8WY07 619 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 EDAQ92838 391 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 PBXIP1Q96AQ6 731 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 CLIC6Q96NY7 704 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 PRRX2Q99811 253 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
RPAIN-204ENST00000405578 CCSER1Q9C0I3 900 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 DDX19AQ9NUU7 478 aaKnown RBP11.74□□□□□ -0.53
RPAIN-204ENST00000405578 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
RPAIN-204ENST00000405578 ARHGEF35A5YM69 484 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 FAM186AA6NE01 2351 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 H3BNC9 293 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 MBTPS2O43462 519 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 ATP4AP20648 1035 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 CDC25AP30304 524 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 LTBRP36941 435 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 RFC5P40937 340 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-204ENST00000405578 HTRA4P83105 476 aaPredicted RBP11.73□□□□□ -0.53
RPAIN-204ENST00000405578 PTK7Q13308 1070 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 SMAD2Q15796 467 aaKnown RBP11.73□□□□□ -0.53
RPAIN-204ENST00000405578 MTERF2Q49AM1 385 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 RRAGBQ5VZM2 374 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 ADALQ6DHV7 355 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 METTL13Q8N6R0 699 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 SAMD11Q96NU1 681 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 GBP4Q96PP9 640 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 KIAA1671Q9BY89 1806 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 CYP26B1Q9NR63 512 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 DBR1Q9UK59 544 aaKnown RBP11.73□□□□□ -0.53
RPAIN-204ENST00000405578 PCDHA7Q9UN72 937 aa11.73□□□□□ -0.53
RPAIN-204ENST00000405578 GOLGA6L22H0YM25 854 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 GAS2O43903 313 aaKnown RBP11.72□□□□□ -0.53
RPAIN-204ENST00000405578 AMHP03971 560 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 KLRC1P26715 233 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 HOXC8P31273 242 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 GRIN1Q05586 938 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-204ENST00000405578 MBTPS1Q14703 1052 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 SPECC1Q5M775 1068 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 HYIQ5T013 277 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 MTHFD1LQ6UB35 978 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 TRIM67Q6ZTA4 783 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 ANO5Q75V66 913 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 EPSTI1Q96J88 318 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 MAP7D2Q96T17 732 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 WRAP73Q9P2S5 460 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-204ENST00000405578 PCDHA2Q9Y5H9 948 aa11.72□□□□□ -0.53
RPAIN-204ENST00000405578 SMIM35A0A1B0GVV1 85 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms