RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SUCLA2Q9P2R7 463 aaPredicted RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 KIAA0391O15091 583 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 PPFIA2O75334 1257 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 GNA14O95837 355 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 NCALDP61601 193 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 KLRC3Q07444 240 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CTTNQ14247 550 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 EPHA7Q15375 998 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 C2CD6Q53TS8 623 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 DUPD1Q68J44 220 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CCDC137Q6PK04 289 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 BZW1Q7L1Q6 419 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 RPGRQ92834 1020 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 ARHGEF2Q92974 986 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 HES6Q96HZ4 224 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 LZTS2Q9BRK4 669 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 GGA2Q9UJY4 613 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 C15orf41Q9Y2V0 281 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CASZ1Q86V15 1759 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 UBR2Q8IWV8 1755 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 RPTORQ8N122 1335 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 TISP43B9A030 160 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 RARAP10276 462 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 NQO1P15559 274 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CRYMQ14894 314 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CBWD6Q4V339 395 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CBWD3Q5JTY5 395 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CBWD5Q5RIA9 395 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 EXOC3L1Q86VI1 746 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 MYCT1Q8N699 235 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 NEDD1Q8NHV4 660 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 ATG4AQ8WYN0 398 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 RMDN2Q96LZ7 410 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 LRRC27Q9C0I9 530 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 CNOT10Q9H9A5 744 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 SIX2Q9NPC8 291 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 STXBP5LQ9Y2K9 1186 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 ABCB11O95342 1321 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 DDX3YO15523 660 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 LGR5O75473 907 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 PIAS1O75925 651 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 ZBTB48P10074 688 aaPredicted RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 MMP13P45452 471 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 MRPL12P52815 198 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 SESN3P58005 492 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 PTENP60484 403 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 POU5F1Q01860 360 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 MTM1Q13496 603 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 GIT2Q14161 759 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 KYNUQ16719 465 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 COBLL1Q53SF7 1204 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
SMC1B-202ENST00000404354 ZNF449Q6P9G9 518 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 SYCE1Q8N0S2 351 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 FITM2Q8N6M3 262 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 HOOK2Q96ED9 719 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 KCNQ5Q9NR82 932 aa10.33□□□□□ -0.76
SMC1B-202ENST00000404354 FOXN3O00409 490 aaPredicted RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 DLATP10515 647 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 GJC1P36383 396 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 MAPK7Q13164 816 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 BIRC2Q13490 618 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 SF3B3Q15393 1217 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 TPH2Q8IWU9 490 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 SRRM1Q8IYB3 904 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 PRELID2Q8N945 189 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 FAM84AQ96KN4 292 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 PKD2L1Q9P0L9 805 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 XIRP1Q702N8 1843 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 SNX3O60493 162 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 TBCAO75347 108 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 FTLP02792 175 aaPredicted RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 CACNB3P54284 484 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 MPP2Q14168 576 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 CNGA2Q16280 664 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 DDB1Q16531 1140 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 THEMIS2Q5TEJ8 643 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 DPY19L2P1Q6NXN4 242 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 PIGWQ7Z7B1 504 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 KIAA0825Q8IV33 1275 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 FAM186BQ8IYM0 893 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 C1orf131Q8NDD1 294 aaKnown RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 KAT5Q92993 513 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 CRAMP1Q96RY5 1269 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 ETNK1Q9HBU6 452 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 ASIC3Q9UHC3 531 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 ZMYND8Q9ULU4 1186 aaPredicted RBP10.32□□□□□ -0.76
SMC1B-202ENST00000404354 PCDHA1Q9Y5I3 950 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 SPAG7O75391 227 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 PAEPP09466 180 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 PYGMP11217 842 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 MFSD14BQ5SR56 506 aa10.32□□□□□ -0.76
SMC1B-202ENST00000404354 FAM182AQ5T1J6 154 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms