RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ZHX3Q9H4I2 956 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 RMND1Q9NWS8 449 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 AKT3Q9Y243 479 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 CAND2O75155 1236 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 SCP2P22307 547 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 NAMPTP43490 491 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 PEX3P56589 373 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 TLE2Q04725 743 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 LAMTOR4Q0VGL1 99 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 COASYQ13057 564 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 TFDP1Q14186 410 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 ODR4Q5SWX8 454 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 RHPN2Q8IUC4 686 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 TRIML1Q8N9V2 468 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
LINC00339-201ENST00000404210 KCNN1Q92952 543 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
LINC00339-201ENST00000404210 OLFML3Q9NRN5 406 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
LINC00339-201ENST00000404210 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 H0YCG3 227 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 GPR32O75388 356 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 VTNP04004 478 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 NPTX2P47972 431 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 GPC3P51654 580 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 NLRP11P59045 1033 aaKnown RBP13.6□□□□□ -0.23
LINC00339-201ENST00000404210 RBL2Q08999 1139 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 FAAP100Q0VG06 881 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 DMP1Q13316 513 aaPredicted RBP13.6□□□□□ -0.23
LINC00339-201ENST00000404210 BFSP2Q13515 415 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 LRRC26Q2I0M4 334 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
LINC00339-201ENST00000404210 TRIM60Q495X7 471 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 ZNF720Q7Z2F6 126 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 ZNF410Q86VK4 478 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
LINC00339-201ENST00000404210 FAM178BQ8IXR5 827 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 CCDC155Q8N6L0 562 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 BSNDQ8WZ55 320 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
LINC00339-201ENST00000404210 FIZ1Q96SL8 496 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 ST6GALNAC4Q9H4F1 302 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 KMT5AQ9NQR1 393 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 MAN1B1Q9UKM7 699 aa13.6□□□□□ -0.23
LINC00339-201ENST00000404210 M0QZ92 97 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
LINC00339-201ENST00000404210 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 ABCD1P33897 745 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 THPOP40225 353 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 CRYBB1P53674 252 aaPredicted RBP13.59□□□□□ -0.23
LINC00339-201ENST00000404210 NCKAP1LP55160 1127 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 PTENP60484 403 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 CAPSQ13938 189 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 MORC3Q14149 939 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 FAM26FQ5R3K3 315 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
LINC00339-201ENST00000404210 SRGAP1Q7Z6B7 1085 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 KSR1Q8IVT5 923 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 RNF149Q8NC42 400 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 WNT8BQ93098 351 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
LINC00339-201ENST00000404210 INO80BQ9C086 356 aaPredicted RBP13.59□□□□□ -0.23
LINC00339-201ENST00000404210 C2orf40Q9H1Z8 148 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 ADAMTS10Q9H324 1103 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 MRPL44Q9H9J2 332 aaKnown RBP13.59□□□□□ -0.23
LINC00339-201ENST00000404210 ATP11BQ9Y2G3 1177 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 PHLPP2Q6ZVD8 1323 aa13.59□□□□□ -0.23
LINC00339-201ENST00000404210 CENPFP49454 3210 aa13.58□□□□□ -0.23
LINC00339-201ENST00000404210 A0A087WZ62 844 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 CKBP12277 381 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 NMT1P30419 496 aaKnown RBP13.58□□□□□ -0.24
LINC00339-201ENST00000404210 EFNA5P52803 228 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 MRPS6P82932 125 aaKnown RBP13.58□□□□□ -0.24
LINC00339-201ENST00000404210 GTF2BQ00403 316 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 MGAT3Q09327 533 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 STK4Q13043 487 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 ALCAMQ13740 583 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 COBLL1Q53SF7 1204 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
LINC00339-201ENST00000404210 HAUS6Q7Z4H7 955 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 ZBTB8OSQ8IWT0 167 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 DEPTORQ8TB45 409 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 ZNF507Q8TCN5 953 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 NLRP4Q96MN2 994 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.24
LINC00339-201ENST00000404210 STRA6Q9BX79 667 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 GCOM2Q9BZD3 368 aaPredicted RBP13.58□□□□□ -0.24
LINC00339-201ENST00000404210 IFT122Q9HBG6 1241 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 SLC39A2Q9NP94 309 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 TBC1D7Q9P0N9 293 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
LINC00339-201ENST00000404210 TRPV2Q9Y5S1 764 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms