RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SRGAP2CP0DJJ0 459 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 CSF2RAP15509 400 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 AMPD3Q01432 767 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 FBXO47Q5MNV8 452 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 DYMQ7RTS9 669 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 TMEM40Q8WWA1 233 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 DNAJC19Q96DA6 116 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 SCLT1Q96NL6 688 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 FDXACB1Q9BRP7 624 aaPredicted RBP32.48■■■□□ 2.79
USP42-202ENST00000404008 LMBRD1Q9NUN5 540 aa32.48■■■□□ 2.79
USP42-202ENST00000404008 H0YGN5 161 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 FPGSQ05932 587 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 TFDP1Q14186 410 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 LPIN1Q14693 890 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 KRBA2Q6ZNG9 492 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 RNF149Q8NC42 400 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 LBHD1Q9BQE6 289 aaPredicted RBP32.47■■■□□ 2.79
USP42-202ENST00000404008 IFT122Q9HBG6 1241 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 SQORQ9Y6N5 450 aa32.47■■■□□ 2.79
USP42-202ENST00000404008 GOLGA6L22H0YM25 854 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 NR1I2O75469 434 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 CXCL10P02778 98 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 POU5F1BQ06416 359 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 CNNM3Q8NE01 707 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 VWCEQ96DN2 955 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 PAGE5Q96GU1 130 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 IFT74Q96LB3 600 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 TRIM9Q9C026 710 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 C17orf75Q9HAS0 396 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 TET1Q8NFU7 2136 aa32.46■■■□□ 2.79
USP42-202ENST00000404008 SFI1A8K8P3 1242 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 GHRP10912 638 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 DARSP14868 501 aaKnown RBP32.45■■■□□ 2.79
USP42-202ENST00000404008 EIF4BP23588 611 aaKnown RBP32.45■■■□□ 2.79
USP42-202ENST00000404008 NAMPTP43490 491 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 AFMP43652 599 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 ZNF131P52739 623 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 MDM2Q00987 491 aaPredicted RBP32.45■■■□□ 2.79
USP42-202ENST00000404008 PPP2R5AQ15172 486 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 CNNM4Q6P4Q7 775 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 GRAMD1CQ8IYS0 662 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 C7orf25Q9BPX7 421 aa32.45■■■□□ 2.79
USP42-202ENST00000404008 GCOM2Q9BZD3 368 aaPredicted RBP32.45■■■□□ 2.79
USP42-202ENST00000404008 RBAK-RBAKDNI3L0D1 243 aa32.45■■■□□ 2.78
USP42-202ENST00000404008 PPIGQ13427 754 aaKnown RBP eCLIP32.45■■■□□ 2.78
USP42-202ENST00000404008 TSHZ1Q6ZSZ6 1077 aa32.45■■■□□ 2.78
USP42-202ENST00000404008 DEFB128Q7Z7B8 93 aa32.45■■■□□ 2.78
USP42-202ENST00000404008 USP38Q8NB14 1042 aa32.45■■■□□ 2.78
USP42-202ENST00000404008 NFKBIZQ9BYH8 718 aa32.45■■■□□ 2.78
USP42-202ENST00000404008 LRRIQ4A6NIV6 560 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 TBCAO75347 108 aaKnown RBP32.44■■■□□ 2.78
USP42-202ENST00000404008 FAM13AO94988 1023 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 PLS3P13797 630 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 PHKA2P46019 1235 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 PEX3P56589 373 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 PTENP60484 403 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 DMP1Q13316 513 aaPredicted RBP32.44■■■□□ 2.78
USP42-202ENST00000404008 IFNLR1Q8IU57 520 aaPredicted RBP32.44■■■□□ 2.78
USP42-202ENST00000404008 AGO3Q9H9G7 860 aaKnown RBP32.44■■■□□ 2.78
USP42-202ENST00000404008 PARVGQ9HBI0 331 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 IL23AQ9NPF7 189 aa32.44■■■□□ 2.78
USP42-202ENST00000404008 NOC2LQ9Y3T9 749 aaKnown RBP32.44■■■□□ 2.78
USP42-202ENST00000404008 MAGEA10P43363 369 aaPredicted RBP32.43■■■□□ 2.78
USP42-202ENST00000404008 NPTX2P47972 431 aa32.43■■■□□ 2.78
USP42-202ENST00000404008 CDCA2Q69YH5 1023 aaPredicted RBP32.43■■■□□ 2.78
USP42-202ENST00000404008 RPUSD2Q8IZ73 545 aaKnown RBP32.43■■■□□ 2.78
USP42-202ENST00000404008 TIGD1Q96MW7 591 aa32.43■■■□□ 2.78
USP42-202ENST00000404008 LARSQ9P2J5 1176 aaKnown RBP32.43■■■□□ 2.78
USP42-202ENST00000404008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.42■■■□□ 2.78
USP42-202ENST00000404008 FRMD3A2A2Y4 597 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 CASP1P29466 404 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 CUL4BQ13620 913 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 PLEKHG4Q58EX7 1191 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 SRGAP1Q7Z6B7 1085 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 BLZF1Q9H2G9 400 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 MINDY3Q9H8M7 445 aa32.42■■■□□ 2.78
USP42-202ENST00000404008 CSDE1O75534 798 aaKnown RBP32.41■■■□□ 2.78
USP42-202ENST00000404008 RPS6KA5O75582 802 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 PFKMP08237 780 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 KANK3Q6NY19 840 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 FAM228AQ86W67 206 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 MYCT1Q8N699 235 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 SPIRE2Q8WWL2 714 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 IFIH1Q9BYX4 1025 aaKnown RBP32.41■■■□□ 2.78
USP42-202ENST00000404008 INO80BQ9C086 356 aaPredicted RBP32.41■■■□□ 2.78
USP42-202ENST00000404008 ZHX3Q9H4I2 956 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 ADGRA3Q8IWK6 1321 aa32.41■■■□□ 2.78
USP42-202ENST00000404008 MYL1P05976 194 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 CD52P31358 61 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 EPHB4P54760 987 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 ASIC1P78348 528 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 PAK2Q13177 524 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 ODR4Q5SWX8 454 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 DEPTORQ8TB45 409 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 NTPCRQ9BSD7 190 aaKnown RBP32.4■■■□□ 2.78
USP42-202ENST00000404008 KIFC3Q9BVG8 833 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 C2orf40Q9H1Z8 148 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 KMT5AQ9NQR1 393 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 DACT1Q9NYF0 836 aa32.4■■■□□ 2.78
USP42-202ENST00000404008 KCNG1Q9UIX4 513 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms