RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ITGB1P05556 798 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 KCNA5P22460 613 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.032e-6■■■□□ 17.6
SDF4-203ENST00000403997 GNL2Q13823 731 aaKnown RBP14.87□□□□□ -0.03
SDF4-203ENST00000403997 ZNF174Q15697 407 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 ABI1Q8IZP0 508 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 FBXO18Q8NFZ0 1043 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 SPPL3Q8TCT6 385 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 PRPF31Q8WWY3 499 aaKnown RBP14.87□□□□□ -0.03
SDF4-203ENST00000403997 PSPC1Q8WXF1 523 aaKnown RBP14.87□□□□□ -0.03
SDF4-203ENST00000403997 NECAB3Q96P71 396 aaPredicted RBP14.87□□□□□ -0.03
SDF4-203ENST00000403997 HSD17B14Q9BPX1 270 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 CHST12Q9NRB3 414 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 AAASQ9NRG9 546 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 DACT1Q9NYF0 836 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 A0A0U1RQF3 1178 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 GAS2O43903 313 aaKnown RBP14.86□□□□□ -0.03
SDF4-203ENST00000403997 ST18O60284 1047 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 SRGAP2CP0DJJ0 459 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 CATSPER4Q7RTX7 472 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 NEK9Q8TD19 979 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 POF1BQ8WVV4 589 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 TCP11Q8WWU5 503 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 TMEM117Q9H0C3 514 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 COL4A3BPQ9Y5P4 624 aa14.86□□□□□ -0.03
SDF4-203ENST00000403997 XIRP2A4UGR9 3374 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 NCK2O43639 380 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 EOMESO95936 686 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 DNAJB1P25685 340 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 EMC2Q15006 297 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 LEXMQ3ZCV2 418 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 TWF2Q6IBS0 349 aaKnown RBP14.85□□□□□ -0.03
SDF4-203ENST00000403997 COLGALT1Q8NBJ5 622 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 PABPC5Q96DU9 382 aaKnown RBP14.85□□□□□ -0.03
SDF4-203ENST00000403997 CCDC43Q96MW1 224 aaKnown RBP14.85□□□□□ -0.03
SDF4-203ENST00000403997 CASD1Q96PB1 797 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 MTRQ99707 1265 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 IGFLR1Q9H665 355 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 CWH43Q9H720 699 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 IFT122Q9HBG6 1241 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 ANKEF1Q9NU02 776 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 RNF19AQ9NV58 838 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 CLDND1Q9NY35 253 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 HCSTQ9UBK5 93 aa14.85□□□□□ -0.03
SDF4-203ENST00000403997 PIN4Q9Y237 131 aaKnown RBP14.85□□□□□ -0.03
SDF4-203ENST00000403997 A0A087WWV3 80 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 POTEMA6NI47 508 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 H3BQ06 376 aaPredicted RBP14.84□□□□□ -0.03
SDF4-203ENST00000403997 ASAP2O43150 1006 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 LYPLA2O95372 231 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 LAG3P18627 525 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 TECP42680 631 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 HYAL1Q12794 435 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 CAMK1Q14012 370 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 CLLU1OSQ5K130 101 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 TTC38Q5R3I4 469 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 LRRC55Q6ZSA7 311 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 SRGAP1Q7Z6B7 1085 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 FERMT3Q86UX7 667 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 NOSTRINQ8IVI9 506 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 THNSL1Q8IYQ7 743 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 RNF149Q8NC42 400 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 MICAL1Q8TDZ2 1067 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 PIGOQ8TEQ8 1089 aa14.84□□□□□ -0.03
SDF4-203ENST00000403997 NOL7Q9UMY1 257 aaKnown RBP14.84□□□□□ -0.03
SDF4-203ENST00000403997 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
SDF4-203ENST00000403997 NCOR1O75376 2440 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 FGF18O76093 207 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 OR52Z1P0C646 297 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 SKIP12755 728 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 IRS1P35568 1242 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 PHKA2P46019 1235 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 ORC2Q13416 577 aaPredicted RBP14.83□□□□□ -0.04
SDF4-203ENST00000403997 MXD4Q14582 209 aaPredicted RBP14.83□□□□□ -0.04
SDF4-203ENST00000403997 CSPP1Q1MSJ5 1256 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 LONRF3Q496Y0 759 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
SDF4-203ENST00000403997 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.04
SDF4-203ENST00000403997 HELQQ8TDG4 1101 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 PPP2R3CQ969Q6 453 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 TRAIPQ9BWF2 469 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 TUFT1Q9NNX1 390 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 KIF3AQ9Y496 699 aa14.83□□□□□ -0.04
SDF4-203ENST00000403997 FNDC1Q4ZHG4 1894 aaPredicted RBP14.82□□□□□ -0.04
SDF4-203ENST00000403997 DGAT1O75907 488 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 SPATA31C1P0DKV0 1188 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 XRCC6P12956 609 aaKnown RBP eCLIP14.82□□□□□ -0.04
SDF4-203ENST00000403997 ATF7P17544 494 aaPredicted RBP14.82□□□□□ -0.04
SDF4-203ENST00000403997 GTF2F1P35269 517 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■■■■□ 22.3
SDF4-203ENST00000403997 TRAPPC10P48553 1259 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 RARRES1P49788 294 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 UBE3AQ05086 875 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 COL19A1Q14993 1142 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 PTCRAQ6ISU1 281 aaPredicted RBP14.82□□□□□ -0.04
SDF4-203ENST00000403997 KCNT2Q6UVM3 1135 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 CATSPER3Q86XQ3 398 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 LRRC43Q8N309 656 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
SDF4-203ENST00000403997 ZNF558Q96NG5 402 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms