RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FGF18O76093 207 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 LAG3P18627 525 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 POLGP54098 1239 aaPredicted RBP17.2■□□□□ 0.34
TPM1-207ENST00000403994 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
TPM1-207ENST00000403994 TRIM29Q14134 588 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 CALCRLQ16602 461 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 KSR1Q8IVT5 923 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 C4orf19Q8IY42 314 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 THNSL1Q8IYQ7 743 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 RNF169Q8NCN4 708 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 DYDC2Q96IM9 177 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 CEP170P1Q96L14 293 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 NLRP4Q96MN2 994 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 DHX33Q9H6R0 707 aaKnown RBP17.2■□□□□ 0.34
TPM1-207ENST00000403994 CD320Q9NPF0 282 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 DACT1Q9NYF0 836 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 RGL1Q9NZL6 768 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 BAG4O95429 457 aaKnown RBP17.19■□□□□ 0.34
TPM1-207ENST00000403994 YWHABP31946 246 aaKnown RBP17.19■□□□□ 0.34
TPM1-207ENST00000403994 RFC5P40937 340 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 UBE3AQ05086 875 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
TPM1-207ENST00000403994 EMC2Q15006 297 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 CLUL1Q15846 466 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 LRRC55Q6ZSA7 311 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 ABI1Q8IZP0 508 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.34
TPM1-207ENST00000403994 IGFLR1Q9H665 355 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 TLR9Q9NR96 1032 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 BMP2KQ9NSY1 1161 aaPredicted RBP17.19■□□□□ 0.34
TPM1-207ENST00000403994 LIMCH1Q9UPQ0 1083 aa17.19■□□□□ 0.34
TPM1-207ENST00000403994 PIN4Q9Y237 131 aaKnown RBP17.19■□□□□ 0.34
TPM1-207ENST00000403994 PBX3P40426 434 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 PHKA2P46019 1235 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 NRIP1P48552 1158 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 HELQQ8TDG4 1101 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 PSPC1Q8WXF1 523 aaKnown RBP17.18■□□□□ 0.34
TPM1-207ENST00000403994 TMEM143Q96AN5 459 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 KIF2CQ99661 725 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 TRAIPQ9BWF2 469 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 ZSWIM4Q9H7M6 989 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 IFT122Q9HBG6 1241 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 CHST12Q9NRB3 414 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 FAM50BQ9Y247 325 aa17.18■□□□□ 0.34
TPM1-207ENST00000403994 ZBTB39O15060 712 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 GAS2O43903 313 aaKnown RBP17.17■□□□□ 0.34
TPM1-207ENST00000403994 GLP2RO95838 553 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 EOMESO95936 686 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 NDUFV1P49821 464 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 ADAM15Q13444 863 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 TWF2Q6IBS0 349 aaKnown RBP17.17■□□□□ 0.34
TPM1-207ENST00000403994 CATSPER4Q7RTX7 472 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 EXOC8Q8IYI6 725 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 EFHBQ8N7U6 833 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 ZNF558Q96NG5 402 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 EIF2AK1Q9BQI3 630 aaKnown RBP17.17■□□□□ 0.34
TPM1-207ENST00000403994 INO80BQ9C086 356 aaPredicted RBP17.17■□□□□ 0.34
TPM1-207ENST00000403994 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
TPM1-207ENST00000403994 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 LZTS1Q9Y250 596 aa17.17■□□□□ 0.34
TPM1-207ENST00000403994 FSCN2O14926 492 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 PPM1AP35813 382 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 ZP2Q05996 745 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 LAMTOR4Q0VGL1 99 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 SMAD4Q13485 552 aaKnown RBP17.16■□□□□ 0.34
TPM1-207ENST00000403994 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 KCNT2Q6UVM3 1135 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 OTUD6AQ7L8S5 288 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 TPH2Q8IWU9 490 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 GJD3Q8N144 294 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
TPM1-207ENST00000403994 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 LLPHQ9BRT6 129 aaKnown RBP17.16■□□□□ 0.34
TPM1-207ENST00000403994 C1QTNF1Q9BXJ1 281 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 MRPL9Q9BYD2 267 aaKnown RBP17.16■□□□□ 0.34
TPM1-207ENST00000403994 MINDY3Q9H8M7 445 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 XPNPEP1Q9NQW7 623 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 CD207Q9UJ71 328 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
TPM1-207ENST00000403994 POTEMA6NI47 508 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 MBTPS2O43462 519 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 SLITRK3O94933 977 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 LYPLA2O95372 231 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 SSTR3P32745 418 aaPredicted RBP17.15■□□□□ 0.34
TPM1-207ENST00000403994 RAB27AP51159 221 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 ERVFC1P60507 584 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 SAFBQ15424 915 aaKnown RBP eCLIP17.15■□□□□ 0.34
TPM1-207ENST00000403994 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
TPM1-207ENST00000403994 RBM23Q86U06 439 aaKnown RBP17.15■□□□□ 0.34
TPM1-207ENST00000403994 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
TPM1-207ENST00000403994 LPPQ93052 612 aa17.15■□□□□ 0.34
TPM1-207ENST00000403994 C8orf76Q96K31 380 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms