RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FGFR4P22455 802 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 SFPQP23246 707 aaKnown RBP eCLIP21.33■■□□□ 1.012e-6■■■□□ 15.5
RTN4-207ENST00000402434 SARSP49591 514 aaKnown RBP21.33■■□□□ 1.01
RTN4-207ENST00000402434 FAM189BP81408 668 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 SLC39A14Q15043 492 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 KCNK18Q7Z418 384 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 IFNLR1Q8IU57 520 aaPredicted RBP21.33■■□□□ 1.01
RTN4-207ENST00000402434 NPAS4Q8IUM7 802 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 RNF149Q8NC42 400 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 ASAP3Q8TDY4 903 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 CDX2Q99626 313 aaPredicted RBP21.33■■□□□ 1.01
RTN4-207ENST00000402434 NT5C3AQ9H0P0 336 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 RC3H2Q9HBD1 1191 aaKnown RBP21.33■■□□□ 1.01
RTN4-207ENST00000402434 CHST12Q9NRB3 414 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 GLRA2P23416 452 aa21.32■■□□□ 1
RTN4-207ENST00000402434 GRB10Q13322 594 aa21.32■■□□□ 1
RTN4-207ENST00000402434 PKP1Q13835 747 aa21.32■■□□□ 1
RTN4-207ENST00000402434 ZNF689Q96CS4 500 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 PNMA5Q96PV4 448 aa21.32■■□□□ 1
RTN4-207ENST00000402434 YME1L1Q96TA2 773 aa21.32■■□□□ 1
RTN4-207ENST00000402434 NFKBIZQ9BYH8 718 aa21.32■■□□□ 1
RTN4-207ENST00000402434 POLR3FQ9H1D9 316 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 MINDY3Q9H8M7 445 aa21.32■■□□□ 1
RTN4-207ENST00000402434 GPRC5CQ9NQ84 441 aa21.32■■□□□ 1
RTN4-207ENST00000402434 FBXO2Q9UK22 296 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 SRPRBQ9Y5M8 271 aaKnown RBP21.32■■□□□ 1
RTN4-207ENST00000402434 LINC01553A4QN01 128 aa21.32■■□□□ 1
RTN4-207ENST00000402434 DGKIO75912 1065 aa21.32■■□□□ 1
RTN4-207ENST00000402434 F13A1P00488 732 aa21.32■■□□□ 1
RTN4-207ENST00000402434 STAG3L1P0CL83 205 aa21.32■■□□□ 1
RTN4-207ENST00000402434 ZSCAN20P17040 1043 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 MARCKSP29966 332 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 UBA7P41226 1012 aa21.32■■□□□ 1
RTN4-207ENST00000402434 NASPP49321 788 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 PTENP60484 403 aa21.32■■□□□ 1
RTN4-207ENST00000402434 CEBPZQ03701 1054 aaKnown RBP21.32■■□□□ 1
RTN4-207ENST00000402434 CAPSQ13938 189 aa21.32■■□□□ 1
RTN4-207ENST00000402434 TFDP1Q14186 410 aa21.32■■□□□ 1
RTN4-207ENST00000402434 TMEM119Q4V9L6 283 aa21.32■■□□□ 1
RTN4-207ENST00000402434 CABP7Q86V35 215 aa21.32■■□□□ 1
RTN4-207ENST00000402434 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
RTN4-207ENST00000402434 COL4A6Q14031 1691 aa21.31■■□□□ 1
RTN4-207ENST00000402434 PHKA2P46019 1235 aa21.31■■□□□ 1
RTN4-207ENST00000402434 PCBP1Q15365 356 aaKnown RBP eCLIP21.31■■□□□ 16e-8■■□□□ 14.5
RTN4-207ENST00000402434 MAEAQ7L5Y9 396 aa21.31■■□□□ 1
RTN4-207ENST00000402434 ZNF396Q96N95 335 aaPredicted RBP21.31■■□□□ 1
RTN4-207ENST00000402434 TRAIPQ9BWF2 469 aa21.31■■□□□ 1
RTN4-207ENST00000402434 ELAC1Q9H777 363 aaKnown RBP21.31■■□□□ 1
RTN4-207ENST00000402434 BECN1Q14457 450 aa21.3■■□□□ 1
RTN4-207ENST00000402434 ZRSR1Q15695 479 aaKnown RBP21.3■■□□□ 1
RTN4-207ENST00000402434 FOXD4L5Q5VV16 416 aaPredicted RBP21.3■■□□□ 1
RTN4-207ENST00000402434 CATSPER4Q7RTX7 472 aa21.3■■□□□ 1
RTN4-207ENST00000402434 LINC00301Q8NCQ3 95 aa21.3■■□□□ 1
RTN4-207ENST00000402434 FOXD4L4Q8WXT5 416 aaPredicted RBP21.3■■□□□ 1
RTN4-207ENST00000402434 CCSER1Q9C0I3 900 aa21.3■■□□□ 1
RTN4-207ENST00000402434 CSRNP2Q9H175 543 aa21.3■■□□□ 1
RTN4-207ENST00000402434 DACT1Q9NYF0 836 aa21.3■■□□□ 1
RTN4-207ENST00000402434 STXBP5LQ9Y2K9 1186 aa21.3■■□□□ 1
RTN4-207ENST00000402434 PCDHB7Q9Y5E2 793 aa21.3■■□□□ 1
RTN4-207ENST00000402434 A0A0U1RQF3 1178 aa21.29■■□□□ 1
RTN4-207ENST00000402434 FAM102BQ5T8I3 360 aa21.29■■□□□ 1
RTN4-207ENST00000402434 RINT1Q6NUQ1 792 aa21.29■■□□□ 1
RTN4-207ENST00000402434 C1orf186Q6ZWK4 172 aa21.29■■□□□ 1
RTN4-207ENST00000402434 SPRED2Q7Z698 418 aa21.29■■□□□ 1
RTN4-207ENST00000402434 CDK5RAP3Q96JB5 506 aa21.29■■□□□ 1
RTN4-207ENST00000402434 PRDM12Q9H4Q4 367 aa21.29■■□□□ 1
RTN4-207ENST00000402434 AGPAT5Q9NUQ2 364 aa21.29■■□□□ 1
RTN4-207ENST00000402434 TMEM161AQ9NX61 479 aa21.29■■□□□ 1
RTN4-207ENST00000402434 TFIP11Q9UBB9 837 aaKnown RBP21.29■■□□□ 1
RTN4-207ENST00000402434 HOXA11P31270 313 aaPredicted RBP21.28■■□□□ 1
RTN4-207ENST00000402434 ERVK-21P61565 698 aa21.28■■□□□ 1
RTN4-207ENST00000402434 SYT2Q8N9I0 419 aaPredicted RBP21.28■■□□□ 1
RTN4-207ENST00000402434 MYLIPQ8WY64 445 aa21.28■■□□□ 1
RTN4-207ENST00000402434 KIFAP3Q92845 792 aa21.28■■□□□ 1
RTN4-207ENST00000402434 CALML4Q96GE6 196 aa21.28■■□□□ 1
RTN4-207ENST00000402434 TGS1Q96RS0 853 aaKnown RBP21.28■■□□□ 1
RTN4-207ENST00000402434 PLIN2Q99541 437 aa21.28■■□□□ 1
RTN4-207ENST00000402434 LRFN2Q9ULH4 789 aa21.28■■□□□ 1
RTN4-207ENST00000402434 ADGRA3Q8IWK6 1321 aa21.28■■□□□ 1
RTN4-207ENST00000402434 SLC12A3P55017 1021 aa21.27■■□□□ 1
RTN4-207ENST00000402434 CDCA2Q69YH5 1023 aaPredicted RBP21.27■■□□□ 1
RTN4-207ENST00000402434 ATL3Q6DD88 541 aa21.27■■□□□ 1
RTN4-207ENST00000402434 USP49Q70CQ1 688 aa21.27■■□□□ 1
RTN4-207ENST00000402434 ECHDC2Q86YB7 292 aa21.27■■□□□ 1
RTN4-207ENST00000402434 KRI1Q8N9T8 703 aaKnown RBP21.27■■□□□ 1
RTN4-207ENST00000402434 BSNDQ8WZ55 320 aa21.27■■□□□ 1
RTN4-207ENST00000402434 CLIC6Q96NY7 704 aa21.27■■□□□ 1
RTN4-207ENST00000402434 RUSC1Q9BVN2 902 aa21.27■■□□□ 1
RTN4-207ENST00000402434 PIN4Q9Y237 131 aaKnown RBP21.27■■□□□ 1
RTN4-207ENST00000402434 ZDHHC9Q9Y397 364 aa21.27■■□□□ 1
RTN4-207ENST00000402434 YEATS4O95619 227 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 BRD1O95696 1058 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 LINC00271P0C7V0 271 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 NAMPTP43490 491 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 MBTD1Q05BQ5 628 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 ZNF598Q86UK7 904 aaKnown RBP21.26■□□□□ 0.99
RTN4-207ENST00000402434 CMTR2Q8IYT2 770 aaKnown RBP21.26■□□□□ 0.99
RTN4-207ENST00000402434 DAW1Q8N136 415 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 LRRC15Q8TF66 581 aa21.26■□□□□ 0.99
RTN4-207ENST00000402434 EPSTI1Q96J88 318 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms