RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SIP14410 1827 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 H0YGN5 161 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 TIMP1P01033 207 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
HMGA1-204ENST00000401473 IQCF3P0C7M6 154 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 MRPS6P82932 125 aaKnown RBP17.65■□□□□ 0.42
HMGA1-204ENST00000401473 BFSP2Q13515 415 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 FAM26DQ5JW98 314 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 RNF149Q8NC42 400 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 SCLYQ96I15 445 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 NLRP4Q96MN2 994 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 TIPINQ9BVW5 301 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 NR2E3Q9Y5X4 410 aa17.65■□□□□ 0.42
HMGA1-204ENST00000401473 FRMD3A2A2Y4 597 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 ASAP2O43150 1006 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 KINO60870 393 aaKnown RBP17.64■□□□□ 0.41
HMGA1-204ENST00000401473 SELPP16109 830 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 PEX3P56589 373 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 DPYDQ12882 1025 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 PNOCQ13519 176 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 VWCEQ96DN2 955 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 DRC1Q96MC2 740 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 FIZ1Q96SL8 496 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 OSMRQ99650 979 aa17.64■□□□□ 0.41
HMGA1-204ENST00000401473 NTPCRQ9BSD7 190 aaKnown RBP17.64■□□□□ 0.41
HMGA1-204ENST00000401473 ADGRA3Q8IWK6 1321 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 KLRC4O43908 158 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 PLS3P13797 630 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 IDEP14735 1019 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 RAG1P15918 1043 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 NPTX2P47972 431 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 POSTNQ15063 836 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 CAMK4Q16566 473 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 LRRC8DQ7L1W4 858 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 NLRP7Q8WX94 980 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 KIFC3Q9BVG8 833 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 LRRC27Q9C0I9 530 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 MINDY3Q9H8M7 445 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 PARVGQ9HBI0 331 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 PRKAG2Q9UGJ0 569 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 CAND2O75155 1236 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 RPLP2P05387 115 aaKnown RBP17.63■□□□□ 0.41
HMGA1-204ENST00000401473 CRYBB1P53674 252 aaPredicted RBP17.63■□□□□ 0.41
HMGA1-204ENST00000401473 MYCT1Q8N699 235 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 BADQ92934 168 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 HPS3Q969F9 1004 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 C17orf75Q9HAS0 396 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 PANK4Q9NVE7 773 aa17.63■□□□□ 0.41
HMGA1-204ENST00000401473 GTPBP6O43824 516 aaPredicted RBP17.62■□□□□ 0.41
HMGA1-204ENST00000401473 NBNO60934 754 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 FAM13AO94988 1023 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
HMGA1-204ENST00000401473 NAMPTP43490 491 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 ASIC1P78348 528 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 CDC42EP1Q00587 391 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 POU5F1BQ06416 359 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 EHHADHQ08426 723 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 ODR4Q5SWX8 454 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 ELOA2Q8IYF1 753 aaPredicted RBP17.62■□□□□ 0.41
HMGA1-204ENST00000401473 CCDC155Q8N6L0 562 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 AGO3Q9H9G7 860 aaKnown RBP17.62■□□□□ 0.41
HMGA1-204ENST00000401473 LARSQ9P2J5 1176 aaKnown RBP17.62■□□□□ 0.41
HMGA1-204ENST00000401473 TRPV2Q9Y5S1 764 aa17.62■□□□□ 0.41
HMGA1-204ENST00000401473 LRRIQ4A6NIV6 560 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 MYL1P05976 194 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 PTENP60484 403 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 HERC4Q5GLZ8 1057 aaPredicted RBP17.61■□□□□ 0.41
HMGA1-204ENST00000401473 FBXO47Q5MNV8 452 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 ZNF410Q86VK4 478 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 SPATA20Q8TB22 786 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 IFT74Q96LB3 600 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 TBC1D7Q9P0N9 293 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 CCDC169A6NNP5 214 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 M0QZ92 97 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 SLC16A4O15374 487 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 TRAK2O60296 914 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 TBCAO75347 108 aaKnown RBP17.61■□□□□ 0.41
HMGA1-204ENST00000401473 GHRP10912 638 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 DARSP14868 501 aaKnown RBP17.61■□□□□ 0.41
HMGA1-204ENST00000401473 CSF2RAP15509 400 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 FGFR4P22455 802 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 DMP1Q13316 513 aaPredicted RBP17.61■□□□□ 0.41
HMGA1-204ENST00000401473 LPIN1Q14693 890 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 NFKBIBQ15653 356 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 SFR1Q86XK3 245 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 FGFBP2Q9BYJ0 223 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 NOC2LQ9Y3T9 749 aaKnown RBP17.61■□□□□ 0.41
HMGA1-204ENST00000401473 PCDHA5Q9Y5H7 936 aa17.61■□□□□ 0.41
HMGA1-204ENST00000401473 PVALEFA0A1B0GWK0 134 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 RPN1P04843 607 aaKnown RBP17.6■□□□□ 0.41
HMGA1-204ENST00000401473 NMT1P30419 496 aaKnown RBP17.6■□□□□ 0.41
HMGA1-204ENST00000401473 COASYQ13057 564 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 KMT5BQ4FZB7 885 aa17.6■□□□□ 0.41
HMGA1-204ENST00000401473 IFNLR1Q8IU57 520 aaPredicted RBP17.6■□□□□ 0.41
HMGA1-204ENST00000401473 CCDC65Q8IXS2 484 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms