RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CPS1P31327 1500 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 HMGB1P1B2RPK0 211 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 KRT3P12035 628 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 PDIA5Q14554 519 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 ZNF564Q8TBZ8 553 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 OSBPL9Q96SU4 736 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 NUP85Q9BW27 656 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 KIF9Q9HAQ2 790 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 RRP15Q9Y3B9 282 aaKnown RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 NPHP3-ACAD11A0A0J9YXS1 232 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 EVI5O60447 810 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 FTLP02792 175 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 SNCBQ16143 134 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 FAM133BQ5BKY9 247 aaKnown RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 TWF2Q6IBS0 349 aaKnown RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 RWDD4Q6NW29 188 aaKnown RBP19.47■□□□□ 0.71
COL18A1-204ENST00000400337 TAF6LQ9Y6J9 622 aa19.47■□□□□ 0.71
COL18A1-204ENST00000400337 CCSER1Q9C0I3 900 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 IL25Q9H293 177 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 FIS1Q9Y3D6 152 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 A0A1W2PQC6 194 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 EYA4O95677 639 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 HMGCS2P54868 508 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 HAUS6Q7Z4H7 955 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 GBP5Q96PP8 586 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 PCDHA10Q9Y5I2 948 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 UBE4BO95155 1302 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 NTSR2O95665 410 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 CALB1P05937 261 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 RFX5P48382 616 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-204ENST00000400337 STRIP1Q5VSL9 837 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 SPOPLQ6IQ16 392 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 SENP2Q9HC62 589 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 EMSYQ7Z589 1322 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 NMT1P30419 496 aaKnown RBP19.46■□□□□ 0.71
COL18A1-204ENST00000400337 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 PDIA6Q15084 440 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 BZW1Q7L1Q6 419 aaKnown RBP19.46■□□□□ 0.71
COL18A1-204ENST00000400337 GSPT2Q8IYD1 628 aaKnown RBP19.46■□□□□ 0.71
COL18A1-204ENST00000400337 RNF25Q96BH1 459 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-204ENST00000400337 KLHL29Q96CT2 875 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 GYS2P54840 703 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 PACSIN2Q9UNF0 486 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-204ENST00000400337 INPP5FQ9Y2H2 1132 aa19.46■□□□□ 0.71
COL18A1-204ENST00000400337 STX1BP61266 288 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 RNF181Q9P0P0 153 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 CAMSAP1Q5T5Y3 1602 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 ZNF710Q8N1W2 664 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 SPATA33Q96N06 139 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 NUDCD1Q96RS6 583 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 PXDNLA1KZ92 1463 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 FDX1P10109 184 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 GNA15P30679 374 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 MTF1Q14872 753 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 C2orf40Q9H1Z8 148 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 IQANK1A0A1B0GTG1 560 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 OPHN1O60890 802 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 HUS1O60921 280 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 NDUFB10O96000 172 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 GNAT1P11488 350 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 TBXAS1P24557 533 aaPredicted RBP19.45■□□□□ 0.7
COL18A1-204ENST00000400337 ASNSD1Q9NWL6 643 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 DLC1Q96QB1 1528 aa19.45■□□□□ 0.7
COL18A1-204ENST00000400337 A0A0G2JLW4 131 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 MTMR2Q13614 643 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 HEY1Q9Y5J3 304 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 ESYT3A0FGR9 886 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 WDR46O15213 610 aaKnown RBP19.44■□□□□ 0.7
COL18A1-204ENST00000400337 ITPK1Q13572 414 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 MMP19Q99542 508 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 MRPL4Q9BYD3 311 aaKnown RBP19.44■□□□□ 0.7
COL18A1-204ENST00000400337 KLC2Q9H0B6 622 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 BAG5Q9UL15 447 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 STRIP2Q9ULQ0 834 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 ABCA9Q8IUA7 1624 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.71e-6■■■■□ 19.6
COL18A1-204ENST00000400337 VPS72Q15906 364 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 CC2D1AQ6P1N0 951 aaPredicted RBP19.44■□□□□ 0.7
COL18A1-204ENST00000400337 LRGUKQ96M69 825 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 DDX47Q9H0S4 455 aaKnown RBP19.44■□□□□ 0.7
COL18A1-204ENST00000400337 VCX3AQ9NNX9 186 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 RBAKQ9NYW8 714 aaPredicted RBP19.44■□□□□ 0.7
COL18A1-204ENST00000400337 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 PPRC1Q5VV67 1664 aaKnown RBP19.44■□□□□ 0.7
COL18A1-204ENST00000400337 TFDP2Q14188 446 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 PDXDC1Q6P996 788 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 EFCAB13Q8IY85 973 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 PCSK1NQ9UHG2 260 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 CAPN11Q9UMQ6 739 aa19.44■□□□□ 0.7
COL18A1-204ENST00000400337 IQCB1Q15051 598 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 CDC42EP5Q6NZY7 148 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 GPD1LQ8N335 351 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 SH2D3AQ9BRG2 576 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 M0QYV0 167 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 CASP2P42575 452 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 FRMD5Q7Z6J6 570 aa19.43■□□□□ 0.7
COL18A1-204ENST00000400337 BEST2Q8NFU1 509 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms