RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 LINC00116Q8NCU8 138 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SLC30A5Q8TAD4 765 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DYDC2Q96IM9 177 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 RMDN2Q96LZ7 410 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 MIS12Q9H081 205 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 IL25Q9H293 177 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 CCDC68Q9H2F9 335 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ABCB6Q9NP58 842 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 A0A1B0GUA9 196 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PRPSAP2O60256 369 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ZSCAN20P17040 1043 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 KLK7P49862 253 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PDE1BQ01064 536 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ZNF211Q13398 564 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 BIRC2Q13490 618 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 TFDP1Q14186 410 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DRAP1Q14919 205 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 ZNF699Q32M78 642 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 RABL6Q3YEC7 729 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 MUM1L1Q5H9M0 696 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SNRNP48Q6IEG0 339 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 LMNTD2Q8IXW0 634 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DEPDC1BQ8WUY9 529 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DCAF4Q8WV16 495 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 MAML1Q92585 1016 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 BPIFA3Q9BQP9 254 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SLC13A1Q9BZW2 595 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 GABBR1Q9UBS5 961 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ABCA1O95477 2261 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 NCOR1O75376 2440 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 FLT1P17948 1338 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 LRRC53A6NM62 1247 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 CASP2P42575 452 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 QARSP47897 775 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 ARPP19P56211 112 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 CCNA1P78396 465 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 IL9RQ01113 521 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 TSNAXIP1Q2TAA8 658 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 QRICH1Q2TAL8 776 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 NAALADL2Q58DX5 795 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PRAMEF18Q5VWM3 479 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 TWF2Q6IBS0 349 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 RCSD1Q6JBY9 416 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ERICH1Q86X53 443 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SFR1Q86XK3 245 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 RPAP3Q9H6T3 665 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 KIF9Q9HAQ2 790 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ZCCHC17Q9NP64 241 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 C5P01031 1676 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 TUBGCP6Q96RT7 1819 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DNAH12Q6ZR08 3092 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 FAM205CA6NFA0 338 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 E9PMD0 336 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 HIP1RO75146 1068 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PMLP29590 882 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 YWHABP31946 246 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 MSH2P43246 934 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PRELPP51888 382 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 FOXD4Q12950 439 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 E2F5Q15329 346 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ALX1Q15699 326 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PCGF5Q86SE9 256 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 METTL16Q86W50 562 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 EXOC8Q8IYI6 725 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 GBP7Q8N8V2 638 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 RNF139Q8WU17 664 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 CDKL2Q92772 493 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 MTRQ99707 1265 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 NUP85Q9BW27 656 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SUDS3Q9H7L9 328 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 IPO11Q9UI26 975 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 FEM1BQ9UK73 627 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DNAJC12Q9UKB3 198 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 NOVA2Q9UNW9 492 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 PHF3Q92576 2039 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 EMSYQ7Z589 1322 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 XPOTO43592 962 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 CTDNEP1O95476 244 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 KRT1P04264 644 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 KITP10721 976 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PLS3P13797 630 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 NCF2P19878 526 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 NR1D1P20393 614 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 GRIN1Q05586 938 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 GPS1Q13098 491 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PDE1CQ14123 709 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 KIF22Q14807 665 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 RC3H1Q5TC82 1133 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 C12orf60Q5U649 245 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SGMS1Q86VZ5 419 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 MAP7D3Q8IWC1 876 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 THNSL1Q8IYQ7 743 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 OR6B3Q8NGW1 331 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 HDAC11Q96DB2 347 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 IFT122Q9HBG6 1241 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 HOXC10Q9NYD6 342 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ADAM22Q9P0K1 906 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 TFR2Q9UP52 801 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 GTF3C1Q12789 2109 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms