RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 GALNT17Q6IS24 598 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 BBOF1Q8ND07 529 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 CSGALNACT1Q8TDX6 532 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 NRBF2Q96F24 287 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 EXO5Q9H790 373 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 SCINQ9Y6U3 715 aa11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 CPSF1Q10570 1443 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-210ENST00000399606 FAM47E-STBD1D6RA91 191 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 CHL1O00533 1208 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 BUB1O43683 1085 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 LMNAP02545 664 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 JAK3P52333 1124 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 BASP1P80723 227 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 RBBP7Q16576 425 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 GNASQ5JWF2 1037 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 C1orf131Q8NDD1 294 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 ZFP42Q96MM3 310 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 PNMA5Q96PV4 448 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 MED4Q9NPJ6 270 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 DFFAO00273 331 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 EPB42P16452 691 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 AKIRIN2Q53H80 203 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 SLFN12LQ6IEE8 588 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 ZBTB18Q99592 522 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 TRIM62Q9BVG3 475 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.54
CACNA1C-210ENST00000399606 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 TEX9Q8N6V9 391 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 NCLNQ969V3 563 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 CACNA2D2Q9NY47 1150 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 PPARGC1AQ9UBK2 798 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 POC1B-GALNT4F8VUJ3 575 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 VCAM1P19320 739 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SNX17Q15036 470 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ARMC2Q8NEN0 867 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ANKRD7Q92527 254 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SAR1BQ9Y6B6 198 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SPDYE5A6NIY4 337 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EFCAB14O75071 495 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 STAT3P40763 770 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 MTMR2Q13614 643 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ZNF235Q14590 738 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 RASGRP4Q8TDF6 673 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SKA1Q96BD8 255 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 KLHL8Q9P2G9 620 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 RNASEH1O60930 286 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SRGAP2O75044 1071 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 COBLO75128 1261 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ADORA1P30542 326 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EXOC3L4Q17RC7 722 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 KIF19Q2TAC6 998 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ANKS6Q68DC2 871 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ALKBH2Q6NS38 261 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 PPP6R3Q5H9R7 873 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SLC26A7Q8TE54 656 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 BHMTQ93088 406 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 TMEM169Q96HH4 297 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 RUNDC3BQ96NL0 473 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EIF3CQ99613 913 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 HYOU1Q9Y4L1 999 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 PQBP1O60828 265 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 ZNF699Q32M78 642 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 FAM26FQ5R3K3 315 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 EFHD1Q9BUP0 239 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 MCM8Q9UJA3 840 aa11.7□□□□□ -0.54
CACNA1C-210ENST00000399606 SWSAP1Q6NVH7 229 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 RABGGTAQ92696 567 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 AHCYL2Q96HN2 611 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 TRIM54Q9BYV2 358 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 FANCBQ8NB91 859 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 UBE2Q2LH0YL09 131 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 IL9RQ01113 521 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 TBC1D9BQ66K14 1250 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 TRIM15Q9C019 465 aa11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
CACNA1C-210ENST00000399606 E9PCH4 1651 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms