RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 RXRAP19793 462 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 CLCN4P51793 760 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 EFCAB12Q6NXP0 572 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 BCL7CQ8WUZ0 217 aaPredicted RBP20.46■□□□□ 0.87
UFD1-202ENST00000399523 RIN2Q8WYP3 895 aaPredicted RBP20.46■□□□□ 0.87
UFD1-202ENST00000399523 VN1R3Q9BXE9 311 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
UFD1-202ENST00000399523 TBC1D17Q9HA65 648 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 WDR81Q562E7 1941 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 GALTP07902 379 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 SP9P0CG40 484 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 TMOD1P28289 359 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 NONOQ15233 471 aaKnown RBP eCLIP20.45■□□□□ 0.86
UFD1-202ENST00000399523 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 TYW1BQ6NUM6 668 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 CASC1Q6TDU7 716 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 NFXL1Q6ZNB6 911 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 TMTC3Q6ZXV5 915 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 DCLK2Q8N568 766 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 CMASQ8NFW8 434 aaPredicted RBP20.45■□□□□ 0.86
UFD1-202ENST00000399523 HINFPQ9BQA5 517 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 TRAIPQ9BWF2 469 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 NRDE2Q9H7Z3 1164 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 DLGAP2Q9P1A6 1054 aa20.45■□□□□ 0.86
UFD1-202ENST00000399523 MAP1BP46821 2468 aaKnown RBP20.45■□□□□ 0.86
UFD1-202ENST00000399523 CCDC69A6NI79 296 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 FAM86B1E9PN63 330 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 IPO5O00410 1097 aaKnown RBP20.44■□□□□ 0.86
UFD1-202ENST00000399523 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
UFD1-202ENST00000399523 PRC1O43663 620 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 FAM86B2P0C5J1 330 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 GPC3P51654 580 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 PHLDB3Q6NSJ2 640 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 ZNF746Q6NUN9 644 aaPredicted RBP20.44■□□□□ 0.86
UFD1-202ENST00000399523 SLC44A3Q8N4M1 653 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 RUFY2Q8WXA3 655 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 RSAD2Q8WXG1 361 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 KLHL5Q96PQ7 755 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 EMILIN2Q9BXX0 1053 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 RHOBTB2Q9BYZ6 727 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 CHST12Q9NRB3 414 aa20.44■□□□□ 0.86
UFD1-202ENST00000399523 CHD8Q9HCK8 2581 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 IGLV3-22A0A075B6J6 115 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 SPDYE4A6NLX3 237 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 LILRB3O75022 631 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 CNPP09543 421 aaKnown RBP20.43■□□□□ 0.86
UFD1-202ENST00000399523 SRFP11831 508 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 FGFR4P22455 802 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 RFX1P22670 979 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 KLRC2P26717 231 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 ZNF76P36508 570 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 LIFRP42702 1097 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 PHKA2P46019 1235 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 AP3B2Q13367 1082 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 AAMPQ13685 434 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 RSPO4Q2I0M5 234 aaPredicted RBP20.43■□□□□ 0.86
UFD1-202ENST00000399523 PPP1R18Q6NYC8 613 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
UFD1-202ENST00000399523 PLA2G4DQ86XP0 818 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 C1orf210Q8IVY1 113 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 SMAP1Q8IYB5 467 aaPredicted RBP20.43■□□□□ 0.86
UFD1-202ENST00000399523 LRRC71Q8N4P6 559 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 SUMF1Q8NBK3 374 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 NXPE3Q969Y0 559 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 ZNF668Q96K58 619 aaPredicted RBP20.43■□□□□ 0.86
UFD1-202ENST00000399523 TBC1D13Q9NVG8 400 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 EPS15L1Q9UBC2 864 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 STK39Q9UEW8 545 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 PCDHA10Q9Y5I2 948 aa20.43■□□□□ 0.86
UFD1-202ENST00000399523 IGHDP01880 384 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 CLK2P49760 499 aaKnown RBP20.42■□□□□ 0.86
UFD1-202ENST00000399523 ADCY7P51828 1080 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 NAPAP54920 295 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 CYP26C1Q6V0L0 522 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 FAM167AQ96KS9 214 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 WDR6Q9NNW5 1121 aaKnown RBP20.42■□□□□ 0.86
UFD1-202ENST00000399523 TBC1D22BQ9NU19 505 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 CA14Q9ULX7 337 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 SIT1Q9Y3P8 196 aa20.42■□□□□ 0.86
UFD1-202ENST00000399523 DCNP07585 359 aaKnown RBP20.41■□□□□ 0.86
UFD1-202ENST00000399523 PSAPP07602 524 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 CHMLP26374 656 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 MCM5P33992 734 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 NOMO2Q5JPE7 1267 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 SPECC1Q5M775 1068 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 GLB1LQ6UWU2 654 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 CRYGNQ8WXF5 182 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 STAMQ92783 540 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 MAP4K1Q92918 833 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 GABBR1Q9UBS5 961 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 SLC12A7Q9Y666 1083 aa20.41■□□□□ 0.86
UFD1-202ENST00000399523 CHD6Q8TD26 2715 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 CYP3A4P08684 503 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 SKIP12755 728 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 GSPT1P15170 499 aaKnown RBP20.4■□□□□ 0.86
UFD1-202ENST00000399523 GBP2P32456 591 aaPredicted RBP20.4■□□□□ 0.86
UFD1-202ENST00000399523 SLC11A1P49279 550 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms