RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 TAGAPQ8N103 731 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 MB21D1Q8N884 522 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 FAM96AQ9H5X1 160 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 PRPF3O43395 683 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 ARL4CP56559 192 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 C6orf118Q5T5N4 469 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 RASSF3Q86WH2 238 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 ZNF560Q96MR9 790 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 GOLGA8IPA6NC78 632 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 GOLGA8JA6NMD2 632 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 HLA-DPA1P20036 260 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 ARL6IP4Q66PJ3 421 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 SYTL3Q4VX76 610 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 LCA5Q86VQ0 697 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 GINM1Q9NU53 330 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 ADAM22Q9P0K1 906 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 ZBTB5O15062 677 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 SEC24BO95487 1268 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 ANO4Q32M45 955 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 BBS9Q3SYG4 887 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 TMEM259Q4ZIN3 620 aa12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 AFF4Q9UHB7 1163 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-206ENST00000399273 WDR91A4D1P6 747 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 DFFAO00273 331 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 TADA2AO75478 443 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 STKLD1Q8NE28 680 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 IL17REQ8NFR9 667 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 ASB14A6NK59 587 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 KRT38O76015 456 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 MCF2P10911 925 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 ZNF197O14709 1029 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 ZSCAN9O15535 394 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 DCTN3O75935 186 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 KRT7P08729 469 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 GCKP35557 465 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 SMYD4Q8IYR2 804 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 LCORLQ8N3X6 602 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 HINFPQ9BQA5 517 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 TRIM55Q9BYV6 548 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PCDHA6Q9UN73 950 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PCDHA8Q9Y5H6 950 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PRRG1O14668 218 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 IGSF3O75054 1194 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 TAS2R42Q7RTR8 314 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 WDR75Q8IWA0 830 aaKnown RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 ZSCAN32Q9NX65 697 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 CFAP69A5D8W1 941 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 KCNQ3O43525 872 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 ESRRAP11474 423 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 RBL2Q08999 1139 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 COPEO14579 308 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 TNPO2O14787 897 aaKnown RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 CXCR5P32302 372 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 TRIP13Q15645 432 aaPredicted RBP12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 MMS22LQ6ZRQ5 1243 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PCDHA13Q9Y5I0 950 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 FDX1P10109 184 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 MAP2K2P36507 400 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 CCT5P48643 541 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PHKG1Q16816 387 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 PROM2Q8N271 834 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 KIF2CQ99661 725 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 CASS4Q9NQ75 786 aa12.35□□□□□ -0.43
CCDC144A-206ENST00000399273 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 LMNAP02545 664 aaKnown RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 CAV1Q03135 178 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 TMEM270Q6UE05 265 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 UBA6A0AVT1 1052 aaPredicted RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 ADRA2BP18089 450 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 TFDP2Q14188 446 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 PPP1R18Q6NYC8 613 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 OTULINQ96BN8 352 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 KLHL29Q96CT2 875 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 PAWRQ96IZ0 340 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms