RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ADGRF4Q8IZF3 695 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 OLIG1Q8TAK6 271 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 REEP2Q9BRK0 252 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 CALUO43852 315 aaPredicted RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 RPL21P46778 160 aaKnown RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 NCALDP61601 193 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 PPATQ06203 517 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 KCNA1Q09470 495 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 MAPK7Q13164 816 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 SLC27A3Q5K4L6 730 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 UBR3Q6ZT12 1888 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 KIF2BQ8N4N8 673 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 SLC30A5Q8TAD4 765 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 NSRP1Q9H0G5 558 aaKnown RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 ECT2Q9H8V3 914 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 TAS2R14Q9NYV8 317 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 GRHL1Q9NZI5 618 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 FAM187AA6NFU0 413 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 A8MUI8 341 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 RSPH10B2B2RC85 870 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 AGTP01019 485 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 RSPH10BP0C881 870 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 RARAP10276 462 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 NQO1P15559 274 aaKnown RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 ANXA13P27216 316 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 CLK2P49760 499 aaKnown RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 C6orf118Q5T5N4 469 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 CRELD2Q6UXH1 353 aaPredicted RBP15.12■□□□□ 0.01
APOB-202ENST00000399256 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 FMNL3Q8IVF7 1028 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 CARD9Q9H257 536 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 RASAL2Q9UJF2 1139 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 NCANO14594 1321 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 TMEM110-MUSTN1A8MSY1 372 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L15C9J2P7 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L13C9JLJ4 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L11C9JVI0 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L18D6R9N7 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L22D6RA61 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L17D6RBQ6 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L19D6RCP7 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L20D6RJB6 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 RGL2O15211 777 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 ADCY2Q08462 1091 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L24Q0WX57 530 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 RIPK1Q13546 671 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 CNGA2Q16280 664 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 ASPRV1Q53RT3 343 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 USP17L6PQ6QN14 398 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 DYDC1Q8WWB3 177 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
APOB-202ENST00000399256 NARFQ9UHQ1 456 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 IRS2Q9Y4H2 1338 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 TNS1Q9HBL0 1735 aaKnown RBP15.11■□□□□ 0.01
APOB-202ENST00000399256 PNMA6FA0A0J9YX94 578 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 IGF2BP3O00425 579 aaKnown RBP eCLIP15.11■□□□□ 0.013e-23■□□□□ 10.2
APOB-202ENST00000399256 LDHCP07864 332 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 TMEM253P0C7T8 217 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 PLCG2P16885 1265 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 SLC8A3P57103 927 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 DHX34Q14147 1143 aaKnown RBP15.11■□□□□ 0.01
APOB-202ENST00000399256 CCDC25Q86WR0 208 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 COL23A1Q86Y22 540 aaPredicted RBP15.11■□□□□ 0.01
APOB-202ENST00000399256 MLXIPLQ9NP71 852 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 FGFR1OP2Q9NVK5 253 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 COG5Q9UP83 839 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 ASTN1O14525 1302 aa15.11■□□□□ 0.01
APOB-202ENST00000399256 HGSO14964 777 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 SNX3O60493 162 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 SOX5P35711 763 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 NAIF1Q69YI7 327 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 L3MBTL3Q96JM7 780 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 PSTPIP2Q9H939 334 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 STK38LQ9Y2H1 464 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 PDXKO00764 312 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 RASGRF2O14827 1237 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 DIAPH2O60879 1101 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 GCNT3O95395 438 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 VCAM1P19320 739 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 LMNB1P20700 586 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 PTGIRP43119 386 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 MARCKSL1P49006 195 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 DRAP1Q14919 205 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 NBPF5PQ86XG9 351 aaPredicted RBP15.1■□□□□ 0.01
APOB-202ENST00000399256 CATSPER3Q86XQ3 398 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 SPICE1Q8N0Z3 855 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 MAB21L3Q8N8X9 362 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 KCNMB3Q9NPA1 279 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 MTMR4Q9NYA4 1195 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 ATP8B3O60423 1300 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 PITPNM2Q9BZ72 1349 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
APOB-202ENST00000399256 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms