RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PPME1Q9Y570 386 aa15.02■□□□□ -0
VCX3A-202ENST00000398729 KIAA1671Q9BY89 1806 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 DMDP11532 3685 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 TBKBP1A7MCY6 615 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 MBTPS2O43462 519 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 NCK2O43639 380 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 FAM189BP81408 668 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 CALCRLQ16602 461 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 HERC4Q5GLZ8 1057 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-202ENST00000398729 OTUD6AQ7L8S5 288 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 ZNF410Q86VK4 478 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 C4orf19Q8IY42 314 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 SLC7A3Q8WY07 619 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 C8orf76Q96K31 380 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 CEP170P1Q96L14 293 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 LXNQ9BS40 222 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 ZSWIM4Q9H7M6 989 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 SH2B1Q9NRF2 756 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-202ENST00000398729 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 SUCLA2Q9P2R7 463 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-202ENST00000398729 MUTYHQ9UIF7 546 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 PCDHA12Q9UN75 941 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 PLAGL2Q9UPG8 496 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 FAM50BQ9Y247 325 aa15.01□□□□□ -0.01
VCX3A-202ENST00000398729 FNDC1Q4ZHG4 1894 aaPredicted RBP15.01□□□□□ -0.01
VCX3A-202ENST00000398729 SPTBN4Q9H254 2564 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 LINC01565O15544 149 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 HOXA2O43364 376 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 NEMFO60524 1076 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 YWHABP31946 246 aaKnown RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 POLGP54098 1239 aaPredicted RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 NPEPPSP55786 919 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 ADAM15Q13444 863 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 SPOUT1Q5T280 376 aaKnown RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 FAM102BQ5T8I3 360 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 RHPN2Q8IUC4 686 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 RNF135Q8IUD6 432 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 DYDC2Q96IM9 177 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 KIF2CQ99661 725 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 INO80BQ9C086 356 aaPredicted RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 ALG13Q9NP73 1137 aaKnown RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 DACT1Q9NYF0 836 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 RGL1Q9NZL6 768 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 WRAP73Q9P2S5 460 aaPredicted RBP15□□□□□ -0.01
VCX3A-202ENST00000398729 MYO15AQ9UKN7 3530 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 ATG2AQ2TAZ0 1938 aa15□□□□□ -0.01
VCX3A-202ENST00000398729 PTPRZ1P23471 2315 aaPredicted RBP14.99□□□□□ -0.01
VCX3A-202ENST00000398729 A0A087WZ62 844 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 CSDE1O75534 798 aaKnown RBP14.99□□□□□ -0.01
VCX3A-202ENST00000398729 FGFR1P11362 822 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 FGFR4P22455 802 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 SFPQP23246 707 aaKnown RBP eCLIP14.99□□□□□ -0.01
VCX3A-202ENST00000398729 RFC5P40937 340 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 GUCY1B3Q02153 619 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 CYP4A11Q02928 519 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 CTTNQ14247 550 aaKnown RBP14.99□□□□□ -0.01
VCX3A-202ENST00000398729 IER5LQ5T953 404 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 ECHDC2Q86YB7 292 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 ABI1Q8IZP0 508 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 FAM184AQ8NB25 1140 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 KLHL23Q8NBE8 558 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 MFSD14AQ96MC6 490 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 NLRP4Q96MN2 994 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 FDXACB1Q9BRP7 624 aaPredicted RBP14.99□□□□□ -0.01
VCX3A-202ENST00000398729 TMEM117Q9H0C3 514 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 IGFLR1Q9H665 355 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 TTC12Q9H892 705 aaPredicted RBP14.99□□□□□ -0.01
VCX3A-202ENST00000398729 PCDHB12Q9Y5F1 795 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 WDR87Q6ZQQ6 2873 aa14.99□□□□□ -0.01
VCX3A-202ENST00000398729 A0A0U1RQF3 1178 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 WNT7AO00755 349 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
VCX3A-202ENST00000398729 TBX10O75333 385 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 CSPG5O95196 566 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 ITGB1P05556 798 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 ATP2B1P20020 1258 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 TXKP42681 527 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
VCX3A-202ENST00000398729 XKR9Q5GH70 373 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 TPH2Q8IWU9 490 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
VCX3A-202ENST00000398729 SPPL3Q8TCT6 385 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
VCX3A-202ENST00000398729 EDAQ92838 391 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 PPP2R3CQ969Q6 453 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 EIF2AK1Q9BQI3 630 aaKnown RBP14.98□□□□□ -0.01
VCX3A-202ENST00000398729 DHX33Q9H6R0 707 aaKnown RBP14.98□□□□□ -0.01
VCX3A-202ENST00000398729 CHST12Q9NRB3 414 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 COL4A3BPQ9Y5P4 624 aa14.98□□□□□ -0.01
VCX3A-202ENST00000398729 SLITRK3O94933 977 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 EOMESO95936 686 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 LAG3P18627 525 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 DNAJB1P25685 340 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 MCM7P33993 719 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 RABEP1Q15276 862 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 KSR1Q8IVT5 923 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 RNF169Q8NCN4 708 aa14.97□□□□□ -0.01
VCX3A-202ENST00000398729 PRSS33Q8NF86 280 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms