RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 FAM47DPA6NHR8 397 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ADCY6O43306 1168 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 KRT81Q14533 505 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ALKBH2Q6NS38 261 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 NT5DC4Q86YG4 428 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ELOA2Q8IYF1 753 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 FAM161BQ96MY7 647 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 IARS2Q9NSE4 1012 aaKnown RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 FAM8A1Q9UBU6 413 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ZNF213O14771 459 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 RIMBP2O15034 1052 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 APLP1P51693 650 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 SMU1Q2TAY7 513 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 YME1L1Q96TA2 773 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ORC3Q9UBD5 711 aaPredicted RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ZBED4O75132 1171 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 GPC3P51654 580 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 SSTP61278 116 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 CSTF3Q12996 717 aaKnown RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 WDR47O94967 919 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 GPTP24298 496 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 SLC1A1P43005 524 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 NR1D2Q14995 579 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 OCLNQ16625 522 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ZCWPW2Q504Y3 356 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 FBXO38Q6PIJ6 1188 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 PDZD4Q76G19 769 aaPredicted RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 CYTH2Q99418 400 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 INTS9Q9NV88 658 aaKnown RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 VANGL2Q9ULK5 521 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 PTPRCP08575 1304 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ARHGAP6O43182 974 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 P4HBP07237 508 aaKnown RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ARL13BQ3SXY8 428 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 CYP4V2Q6ZWL3 525 aaPredicted RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 CASKIN1Q8WXD9 1431 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 RHAGQ02094 409 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 SF3A3Q12874 501 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCBE1-201ENST00000398179 IRF5Q13568 498 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 CCDC36Q8IYA8 594 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 DNAJB4Q9UDY4 337 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
CCBE1-201ENST00000398179 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 MTSS1O43312 755 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 GAS7O60861 476 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 CPEP16870 476 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 CUL4AQ13619 759 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 PPP2R5BQ15173 497 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 WDR45BQ5MNZ6 344 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 MIB1Q86YT6 1006 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 CALML4Q96GE6 196 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 IFT140Q96RY7 1462 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 M0R2C6 588 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 PDLIM1O00151 329 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 PPP1R37O75864 691 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 MAPK1P28482 360 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 ACADVLP49748 655 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 C21orf59P57076 290 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 DSTNP60981 165 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 TEDDM1Q5T9Z0 273 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 PFDN2Q9UHV9 154 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 STAT1P42224 750 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 RPP38P78345 283 aaKnown RBP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 BBS1Q8NFJ9 593 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 BLOC1S5Q8TDH9 187 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 ANKRD7Q92527 254 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 GIN1Q9NXP7 522 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 F6X3S4 739 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 ARID5AQ03989 594 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 NSUN2Q08J23 767 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 SPDYAQ5MJ70 313 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 SLC35C2Q9NQQ7 365 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 BTN3A3O00478 584 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 SFNP31947 248 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms