RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PDCP20941 246 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 SYT1P21579 422 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 GATMP50440 423 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 EPC2Q52LR7 807 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 BRAPQ7Z569 592 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 IFNLR1Q8IU57 520 aaPredicted RBP18.6■□□□□ 0.57
APTR-201ENST00000398043 TMEM192Q8IY95 271 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 ASAP3Q8TDY4 903 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 GDPD5Q8WTR4 605 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 NLRP4Q96MN2 994 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 SCLT1Q96NL6 688 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 TRAIPQ9BWF2 469 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 INO80BQ9C086 356 aaPredicted RBP18.6■□□□□ 0.57
APTR-201ENST00000398043 ATP6V0A4Q9HBG4 840 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 CHST12Q9NRB3 414 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 TMEM161AQ9NX61 479 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 MTUS1Q9ULD2 1270 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 PP2D1A8MPX8 630 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 ATF7P17544 494 aaPredicted RBP18.59■□□□□ 0.57
APTR-201ENST00000398043 IGFBP4P22692 258 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 POU5F1BQ06416 359 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 MXD4Q14582 209 aaPredicted RBP18.59■□□□□ 0.57
APTR-201ENST00000398043 ARL6IP4Q66PJ3 421 aaKnown RBP18.59■□□□□ 0.57
APTR-201ENST00000398043 HAUS3Q68CZ6 603 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 ZNF598Q86UK7 904 aaKnown RBP18.59■□□□□ 0.57
APTR-201ENST00000398043 ECHDC2Q86YB7 292 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 FBXO22Q8NEZ5 403 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 LMCD1Q9NZU5 365 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 PCDHB7Q9Y5E2 793 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 TRIP11Q15643 1979 aa18.59■□□□□ 0.57
APTR-201ENST00000398043 A0A0U1RQF3 1178 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 H3BNC9 293 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 SFPQP23246 707 aaKnown RBP eCLIP18.58■□□□□ 0.56
APTR-201ENST00000398043 GLRA2P23416 452 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 CDC25AP30304 524 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 CCT6AP40227 531 aaKnown RBP18.58■□□□□ 0.56
APTR-201ENST00000398043 PTENP60484 403 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 RESTQ13127 1097 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 CAPSQ13938 189 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
APTR-201ENST00000398043 FAM102BQ5T8I3 360 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 DTHD1Q6ZMT9 781 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 RNF149Q8NC42 400 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 RAB34Q9BZG1 259 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 STK24Q9Y6E0 443 aa18.58■□□□□ 0.56
APTR-201ENST00000398043 MRPL42Q9Y6G3 142 aaKnown RBP18.58■□□□□ 0.56
APTR-201ENST00000398043 TDRD15B5MCY1 1934 aaKnown RBP18.58■□□□□ 0.56
APTR-201ENST00000398043 A0A0C4DFX4 3053 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 VPS37CA5D8V6 355 aaPredicted RBP18.57■□□□□ 0.56
APTR-201ENST00000398043 USO1O60763 962 aaKnown RBP18.57■□□□□ 0.56
APTR-201ENST00000398043 ZSCAN20P17040 1043 aaPredicted RBP18.57■□□□□ 0.56
APTR-201ENST00000398043 HOXA11P31270 313 aaPredicted RBP18.57■□□□□ 0.56
APTR-201ENST00000398043 BMPR1AP36894 532 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 HYIQ5T013 277 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 SNX29Q8TEQ0 813 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 NFKBIZQ9BYH8 718 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 GPRC5CQ9NQ84 441 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 AGPAT5Q9NUQ2 364 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
APTR-201ENST00000398043 LRFN2Q9ULH4 789 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 KIAA1024Q9UPX6 916 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 MTMR6Q9Y217 621 aa18.57■□□□□ 0.56
APTR-201ENST00000398043 FGFR1P11362 822 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 CYP11B2P19099 503 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 PADI6Q6TGC4 694 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 POLR3FQ9H1D9 316 aaPredicted RBP18.56■□□□□ 0.56
APTR-201ENST00000398043 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 DDX19AQ9NUU7 478 aaKnown RBP18.56■□□□□ 0.56
APTR-201ENST00000398043 DACT1Q9NYF0 836 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
APTR-201ENST00000398043 EOMESO95936 686 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 RB1P06400 928 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 PHKA2P46019 1235 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 PTPAQ15257 358 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 CCDC85BQ15834 202 aaPredicted RBP18.55■□□□□ 0.56
APTR-201ENST00000398043 AMHR2Q16671 573 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 PAN2Q504Q3 1202 aaKnown RBP18.55■□□□□ 0.56
APTR-201ENST00000398043 CLLU1OSQ5K130 101 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 CATSPER4Q7RTX7 472 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 MCPH1Q8NEM0 835 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 CASD1Q96PB1 797 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 PNMA5Q96PV4 448 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 PRDM6Q9NQX0 595 aa18.55■□□□□ 0.56
APTR-201ENST00000398043 ARHGEF35A5YM69 484 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 VWA3AA6NCI4 1184 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 GTPBP6O43824 516 aaPredicted RBP18.54■□□□□ 0.56
APTR-201ENST00000398043 ZNF623O75123 536 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 EYA4O95677 639 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 CTNNB1P35222 781 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 GPM6BQ13491 265 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 PCBP1Q15365 356 aaKnown RBP eCLIP18.54■□□□□ 0.56
APTR-201ENST00000398043 SF3A1Q15459 793 aaKnown RBP18.54■□□□□ 0.56
APTR-201ENST00000398043 UBXN11Q5T124 520 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 KRT79Q5XKE5 535 aa18.54■□□□□ 0.56
APTR-201ENST00000398043 LRRC55Q6ZSA7 311 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms