RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TARBP2Q15633 366 aaKnown RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 NOM1Q5C9Z4 860 aaKnown RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 MFSD14AQ96MC6 490 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 FRMD8P1Q9BZ68 369 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 MRPL44Q9H9J2 332 aaKnown RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF277Q9NRM2 450 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 CASP8AP2Q9UKL3 1982 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TGFB1I1O43294 461 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TOM1L1O75674 476 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ZACNQ401N2 412 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 CFAP58Q5T655 872 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 KLHDC7AQ5VTJ3 777 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 MAMDC4Q6UXC1 1216 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ATP6V0A4Q9HBG4 840 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 PXMP2Q9NR77 195 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TAB2Q9NYJ8 693 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 DNAJC25-GNG10A0A024R161 153 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TEX33O43247 280 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 WHAMMQ8TF30 809 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 KIFC2Q96AC6 838 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 SELENOOQ9BVL4 669 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 A1CFQ9NQ94 594 aaKnown RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 SYNGAP1Q96PV0 1343 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 GOLGA6L10A0A0M3HER8 536 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ZRANB2O95218 330 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 KCNA2P16389 499 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 NCBP1Q09161 790 aaKnown RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 KIF22Q14807 665 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ATP8B4Q8TF62 1192 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 FRMD8Q9BZ67 464 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 APEX2Q9UBZ4 518 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 NCANO14594 1321 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ZNFX1Q9P2E3 1918 aaKnown RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 CCDC66A2RUB6 948 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 RBL2Q08999 1139 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 KLHL30Q0D2K2 578 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 CCDC174Q6PII3 467 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 FBXL13Q8NEE6 735 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ACTRT1Q8TDG2 376 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 FBXW7Q969H0 707 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 DEF6Q9H4E7 631 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 PRMT7Q9NVM4 692 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 PCDHB2Q9Y5E7 798 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 DOCK3Q8IZD9 2030 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 FRMPD2Q68DX3 1309 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 SART1O43290 800 aaKnown RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 KPNA6O60684 536 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ERBB2P04626 1255 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 CASQ1P31415 396 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 FOSBP53539 338 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ABHD15Q6UXT9 468 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ARMC9Q7Z3E5 817 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 TRMT44Q8IYL2 757 aaKnown RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 DCPSQ96C86 337 aaKnown RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 WRNIP1Q96S55 665 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 INO80BQ9C086 356 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 CYLDQ9NQC7 956 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 WDR35Q9P2L0 1181 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SETSIPP0DME0 302 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 LAMC2Q13753 1193 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ACAP1Q15027 740 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF484Q5JVG2 852 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 MIS18BP1Q6P0N0 1132 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ALKBH5Q6P6C2 394 aaKnown RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SYT11Q9BT88 431 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 PORCNQ9H237 461 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 JAG2Q9Y219 1238 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ECM2O94769 699 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 GDF11O95390 407 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF135P52742 658 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ILF2Q12905 390 aaKnown RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 TFDP1Q14186 410 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 KCTD2Q14681 263 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 DAW1Q8N136 415 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 UBXN6Q9BZV1 441 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 COL4A5P29400 1685 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ADCY3O60266 1144 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 TOMM70O94826 608 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 AARSP49588 968 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 MCL1Q07820 350 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 KIAA1328Q86T90 577 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SFR1Q86XK3 245 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 FAM71AQ8IYT1 594 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SPATC1LQ9H0A9 340 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 CYP3A43Q9HB55 503 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SLC9A2Q9UBY0 812 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 HBP1O60381 514 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 AKAP3O75969 853 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 RDXP35241 583 aaKnown RBP6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SLC1A1P43005 524 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 FAM110CQ1W6H9 321 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 DPY19L2P1Q6NXN4 242 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM161BQ8NDZ6 487 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 CCHCR1Q8TD31 782 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 POTEFA5A3E0 1075 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF233A6NK53 670 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 EXOC3O60645 756 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SUPT20HL2P0C7V6 817 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 POTEIP0CG38 1075 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms