RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TSPYL2Q9H2G4 693 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 RBM12Q9NTZ6 932 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 DMAC2Q9NW81 257 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 GGA1Q9UJY5 639 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PCDHA2Q9Y5H9 948 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ACTL7BQ9Y614 415 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SREBF1P36956 1147 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 FNTAP49354 379 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TPD52P55327 224 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 DYNC1I2Q13409 638 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 IRF2BP2Q7Z5L9 587 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SYT2Q8N9I0 419 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 HAS1Q92839 578 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 DYDC2Q96IM9 177 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ANO3Q9BYT9 981 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PABPC3Q9H361 631 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SLC39A2Q9NP94 309 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ANKRD36CQ5JPF3 1778 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 MAP3K7O43318 606 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 NOL4O94818 638 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 VEGFAP15692 232 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 MSH2P43246 934 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 KCNH2Q12809 1159 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PSMD6Q15008 389 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 NGLY1Q96IV0 654 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 CFAP57Q96MR6 1250 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PCDHB13Q9Y5F0 798 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 NCK2O43639 380 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 DIAPH2O60879 1101 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SKAP2O75563 359 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 MMEP08473 750 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PLA2G4BP0C869 781 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PDE6CP51160 858 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 DPY19L2P1Q6NXN4 242 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ZC3H18Q86VM9 953 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 BICD1Q96G01 975 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 FGD4Q96M96 766 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PIGSQ96S52 555 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 RIT2Q99578 217 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 BAZ2BQ9UIF8 2168 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 POTEFA5A3E0 1075 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PP2D1A8MPX8 630 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 C21orf2O43822 256 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TCEA3O75764 348 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ABL1P00519 1130 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 POTEIP0CG38 1075 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 FCER1AP12319 257 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 GSCP56915 257 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 Q4G0T1 1027 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 POTEEQ6S8J3 1075 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 CCDC110Q8TBZ0 833 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 FBXO41Q8TF61 875 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 CCT8L2Q96SF2 557 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ECT2Q9H8V3 914 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PSTPIP2Q9H939 334 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TUFT1Q9NNX1 390 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 GTF3C4Q9UKN8 822 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 EPHB6O15197 1021 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ENTPD3O75355 529 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 AGTP01019 485 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 CYP2D6P10635 497 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ATP2A2P16615 1042 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ABCB4P21439 1286 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 BTDP43251 543 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 PTENP60484 403 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 POLR2FP61218 127 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ERVK-9P63128 1117 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SPDYAQ5MJ70 313 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 MFSD14BQ5SR56 506 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TATDN2Q93075 761 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TSNARE1Q96NA8 513 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 ZIM3Q96PE6 472 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 HSD17B14Q9BPX1 270 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 AP1M1Q9BXS5 423 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SYNCQ9H7C4 482 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 JMJD4Q9H9V9 463 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 GGT7Q9UJ14 662 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 AMFRQ9UKV5 643 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 FRMPD4Q14CM0 1322 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 GMNCA6NCL1 334 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 PPP1R12AO14974 1030 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 EVI5O60447 810 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 CCNT1O60563 726 aaKnown RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 PLA2G6O60733 806 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 ZBTB48P10074 688 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SKIP12755 728 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SLC18A1P54219 525 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 CAV1Q03135 178 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 KCNMA1Q12791 1236 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SLC30A9Q6PML9 568 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 TLCD1Q96CP7 247 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 HAUS1Q96CS2 278 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 EHMT1Q9H9B1 1298 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 UVRAGQ9P2Y5 699 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 PLTPP55058 493 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SPIRE1Q08AE8 756 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 XRCC4Q13426 336 aa5.86□□□□□ -1.47
PTPRD-205ENST00000397611 SCYL3Q8IZE3 742 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms