RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PCSK1NQ9UHG2 260 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 KRT37O76014 449 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 AKT1P31749 480 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 BAG6P46379 1132 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 SGO1Q5FBB7 561 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 N6AMT1Q9Y5N5 214 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 ERBB3P21860 1342 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 CHGBP05060 677 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 APBA1Q02410 837 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 GTF2H3Q13889 308 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 IFNEQ86WN2 208 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 NOP53Q9NZM5 478 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 PIK3R2O00459 728 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 IL10P22301 178 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 RALGDSQ12967 914 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 G2E3Q7L622 706 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 CCT7Q99832 543 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 NR1D1P20393 614 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 GUCY1A3Q02108 690 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 RUNX1T1Q06455 604 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 EPM2AIP1Q7L775 607 aaPredicted RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 ADD3Q9UEY8 706 aaKnown RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 TEDDM1Q5T9Z0 273 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 ANO5Q75V66 913 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 LRRC8AQ8IWT6 810 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 REXO4Q9GZR2 422 aaKnown RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 BTBD18B2RXH4 712 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 ACTN3Q08043 901 aaPredicted RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 TMA16Q96EY4 203 aaKnown RBP13.11□□□□□ -0.31
SMU1-201ENST00000397149 GINS4Q9BRT9 223 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 ADGRA2Q96PE1 1338 aa13.11□□□□□ -0.31
SMU1-201ENST00000397149 CPB1P15086 417 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 NDUFA8P51970 172 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 BNIPLQ7Z465 357 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 ARHGAP45Q92619 1136 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 MAGEB5Q9BZ81 275 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 EHD2Q9NZN4 543 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 E2F8A0AVK6 867 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 TEX28O15482 410 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 MMEP08473 750 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 SERPINB4P48594 390 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 RGS5O15539 181 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 TBC1D19Q8N5T2 526 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 DCTPP1Q9H773 170 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 IRF1P10914 325 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 GUCA1AP43080 201 aaPredicted RBP13.1□□□□□ -0.31
SMU1-201ENST00000397149 GYS2P54840 703 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 KRT31Q15323 416 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 BTN2A1Q7KYR7 527 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 JADE3Q92613 823 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 TUBGCP3Q96CW5 907 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 SPATA1Q5VX52 437 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 ARMC6Q6NXE6 501 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
SMU1-201ENST00000397149 ADAM33Q9BZ11 813 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
SMU1-201ENST00000397149 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 SKAP2O75563 359 aaPredicted RBP13.1□□□□□ -0.31
SMU1-201ENST00000397149 TJP3O95049 919 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 HMBSP08397 361 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 PSMA3P25788 255 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 ALDH18A1P54886 795 aaKnown RBP13.1□□□□□ -0.31
SMU1-201ENST00000397149 HPCAP84074 193 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 URGCPQ8TCY9 931 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 NFU1Q9UMS0 254 aa13.1□□□□□ -0.31
SMU1-201ENST00000397149 PPIEQ9UNP9 301 aaKnown RBP13.1□□□□□ -0.31
SMU1-201ENST00000397149 IQCA1LA6NCM1 817 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 ADORA2BP29275 332 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 RWDD2BP57060 319 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 TMEM154Q6P9G4 183 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 POMGNT2Q8NAT1 580 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 TNKSO95271 1327 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 A0A087WWV3 80 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 AKAP10O43572 662 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 ALKBH2Q6NS38 261 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 SIKE1Q9BRV8 207 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 TCN1P20061 433 aaPredicted RBP13.09□□□□□ -0.31
SMU1-201ENST00000397149 KBTBD3Q8NAB2 608 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms