RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 STK39Q9UEW8 545 aa18.33■□□□□ 0.52
CLTA-203ENST00000396603 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
CLTA-203ENST00000396603 CPLX1O14810 134 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 PER2O15055 1255 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 CHMP2AO43633 222 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 DKC1O60832 514 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLTA-203ENST00000396603 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
CLTA-203ENST00000396603 ZXDAP98168 799 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 TOB2Q14106 344 aaPredicted RBP18.32■□□□□ 0.52
CLTA-203ENST00000396603 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
CLTA-203ENST00000396603 CLLU1OSQ5K130 101 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 BLIDQ8IZY5 108 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 SLC39A11Q8N1S5 342 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 ETNPPLQ8TBG4 499 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 CASP10Q92851 521 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 FBXL18Q96ME1 805 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 S1PR5Q9H228 398 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 HCSTQ9UBK5 93 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 CYP46A1Q9Y6A2 500 aa18.32■□□□□ 0.52
CLTA-203ENST00000396603 MAFO75444 373 aaPredicted RBP18.31■□□□□ 0.52
CLTA-203ENST00000396603 ALDH7A1P49419 539 aaKnown RBP18.31■□□□□ 0.52
CLTA-203ENST00000396603 RAB27AP51159 221 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 NHLH1Q02575 133 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 ITIH3Q06033 890 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 SIGLEC14Q08ET2 396 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 GIT2Q14161 759 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 NONOQ15233 471 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLTA-203ENST00000396603 TPRNQ4KMQ1 711 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 PLPP4Q5VZY2 271 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 KRT25Q7Z3Z0 450 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 TMC7Q7Z402 723 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 MRPL43Q8N983 215 aaKnown RBP18.31■□□□□ 0.52
CLTA-203ENST00000396603 NECTIN4Q96NY8 510 aa18.31■□□□□ 0.52
CLTA-203ENST00000396603 NCOA5Q9HCD5 579 aaKnown RBP18.31■□□□□ 0.52
CLTA-203ENST00000396603 SEPT9Q9UHD8 586 aaPredicted RBP18.31■□□□□ 0.52
CLTA-203ENST00000396603 TMEM221A6NGB7 291 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 M0R296 226 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 ZNF623O75123 536 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 STBD1O95210 358 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 TECP42680 631 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 PHKA2P46019 1235 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 PSMC5P62195 406 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 IRAK3Q9Y616 596 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 TRIOO75962 3097 aa18.3■□□□□ 0.52
CLTA-203ENST00000396603 CDKL5O76039 1030 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 TDP2O95551 362 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 GCFC2P16383 781 aaKnown RBP18.29■□□□□ 0.52
CLTA-203ENST00000396603 POLGP54098 1239 aaPredicted RBP18.29■□□□□ 0.52
CLTA-203ENST00000396603 PPP2R5CQ13362 524 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 NPY5RQ15761 445 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 MTERF2Q49AM1 385 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 PPP4R3AQ6IN85 833 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 SYCE2Q6PIF2 218 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 SUGP1Q8IWZ8 645 aaKnown RBP18.29■□□□□ 0.52
CLTA-203ENST00000396603 TMEM169Q96HH4 297 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 FAM20AQ96MK3 541 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 NAP1L4Q99733 375 aaKnown RBP18.29■□□□□ 0.52
CLTA-203ENST00000396603 DDX25Q9UHL0 483 aaKnown RBP18.29■□□□□ 0.52
CLTA-203ENST00000396603 WDR81Q562E7 1941 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 ZNF318Q5VUA4 2279 aa18.29■□□□□ 0.52
CLTA-203ENST00000396603 C2orf71A6NGG8 1288 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 HIDE1A8MVS5 230 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 TBX3O15119 743 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 GAS2O43903 313 aaKnown RBP18.28■□□□□ 0.52
CLTA-203ENST00000396603 XBP1P17861 261 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 BCAR1P56945 870 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 PTPN21Q16825 1174 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 HELQQ8TDG4 1101 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 PBXIP1Q96AQ6 731 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 RPGRIP1Q96KN7 1286 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 KCNMB3Q9NPA1 279 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 DZANK1Q9NVP4 752 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 SUCLA2Q9P2R7 463 aaPredicted RBP18.28■□□□□ 0.52
CLTA-203ENST00000396603 HCFC2Q9Y5Z7 792 aa18.28■□□□□ 0.52
CLTA-203ENST00000396603 STK36Q9NRP7 1315 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 A0A087WZ62 844 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 QARSP47897 775 aaKnown RBP18.27■□□□□ 0.52
CLTA-203ENST00000396603 NUBP1P53384 320 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 PTPN5P54829 565 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 DRP2Q13474 957 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.52
CLTA-203ENST00000396603 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
CLTA-203ENST00000396603 CES5AQ6NT32 575 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 GLB1LQ6UWU2 654 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 ANO5Q75V66 913 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 ALYREFQ86V81 257 aaKnown RBP18.27■□□□□ 0.52
CLTA-203ENST00000396603 FBXL6Q8N531 539 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 RNF169Q8NCN4 708 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 SLC7A3Q8WY07 619 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 PGBD4Q96DM1 585 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 FDXACB1Q9BRP7 624 aaPredicted RBP18.27■□□□□ 0.52
CLTA-203ENST00000396603 ADAM7Q9H2U9 754 aa18.27■□□□□ 0.52
CLTA-203ENST00000396603 TECTAO75443 2155 aa18.27■□□□□ 0.51
CLTA-203ENST00000396603 PBX3P40426 434 aa18.26■□□□□ 0.51
CLTA-203ENST00000396603 MRE11P49959 708 aa18.26■□□□□ 0.51
CLTA-203ENST00000396603 RBM10P98175 930 aaKnown RBP18.26■□□□□ 0.51
CLTA-203ENST00000396603 DDX53Q86TM3 631 aaKnown RBP18.26■□□□□ 0.51
CLTA-203ENST00000396603 RHPN2Q8IUC4 686 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms