RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ZFYVE19Q96K21 471 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
COL4A3-202ENST00000396578 DEPDC1Q5TB30 811 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 PLD3Q8IV08 490 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 TEX9Q8N6V9 391 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 ATP6V1G3Q96LB4 118 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 SHANK2Q9UPX8 1470 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 BRAFP15056 766 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 DDX5P17844 614 aaKnown RBP14.87□□□□□ -0.03
COL4A3-202ENST00000396578 MTERF2Q49AM1 385 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 DDX42Q86XP3 938 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL4A3-202ENST00000396578 YEATS2Q9ULM3 1422 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 SUPT3HO75486 399 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 RUBCNLQ9H714 662 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 TBC1D23Q9NUY8 699 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 SYNMO15061 1565 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 SH2B2O14492 632 aaPredicted RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 HSPA1AP0DMV8 641 aaKnown RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 HSPA1BP0DMV9 641 aaKnown RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 ADORA1P30542 326 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 DOK7Q18PE1 504 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 CCNYL1Q8N7R7 359 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 CNOT8Q9UFF9 292 aaKnown RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 PRPF3O43395 683 aaKnown RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 MYO1DO94832 1006 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 GSNP06396 782 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 LBRQ14739 615 aaKnown RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 RNF219Q5W0B1 726 aaPredicted RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 SARM1Q6SZW1 724 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 PLEKHM3Q6ZWE6 761 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 SULF1Q8IWU6 871 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 PCCAP05165 728 aaPredicted RBP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 PHF21AQ96BD5 680 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 BPIFA3Q9BQP9 254 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 PHKA1P46020 1223 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 ARPP19P56211 112 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 RRM2BQ7LG56 351 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL4A3-202ENST00000396578 NUP85Q9BW27 656 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 LZTS1Q9Y250 596 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 KRT87PA6NCN2 255 aa14.86□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF263O14978 683 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 OSBPP22059 807 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 CHRNA3P32297 505 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 INPP5AQ14642 412 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 SYDE2Q5VT97 1194 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 TEKT4Q8WW24 435 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 BRIP1Q9BX63 1249 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 ATP6V0A4Q9HBG4 840 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 CFAP69A5D8W1 941 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 GGPS1O95749 300 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 IRX1P78414 480 aaPredicted RBP14.85□□□□□ -0.03
COL4A3-202ENST00000396578 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
COL4A3-202ENST00000396578 KRT72Q14CN4 511 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 GSPT2Q8IYD1 628 aaKnown RBP14.85□□□□□ -0.03
COL4A3-202ENST00000396578 OTULINQ96BN8 352 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 TTC7AQ9ULT0 858 aaPredicted RBP14.85□□□□□ -0.03
COL4A3-202ENST00000396578 AURKCQ9UQB9 309 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 ANO9A1A5B4 782 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 HSPA9P38646 679 aaKnown RBP14.85□□□□□ -0.03
COL4A3-202ENST00000396578 TFDP2Q14188 446 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 RFX8Q6ZV50 586 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 NLRP4Q96MN2 994 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 CYP21A2P08686 494 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 ATP11CQ8NB49 1132 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 BMP3P12645 472 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 CUL4AQ13619 759 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 DDIASQ8IXT1 998 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 PPM1NQ8N819 430 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 GANCQ8TET4 914 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 WNT8AQ9H1J5 351 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 XDHP47989 1333 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 BNIP3LO60238 219 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 TBC1D4O60343 1298 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 PGM1P36871 562 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF589Q86UQ0 364 aaPredicted RBP14.85□□□□□ -0.03
COL4A3-202ENST00000396578 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 SYNDIG1LA6NDD5 238 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 LGALS16A8MUM7 142 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 NBPF20Q3BBV1 942 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 PASD1Q8IV76 773 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 HEMGNQ9BXL5 484 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 SH3GLB2Q9NR46 395 aa14.85□□□□□ -0.03
COL4A3-202ENST00000396578 CDC25AP30304 524 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 ADD2P35612 726 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 VCPP55072 806 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 CCDC15Q0P6D6 951 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 CYTH1Q15438 398 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 MYO5CQ9NQX4 1742 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 C1orf228Q6PIY5 440 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 THEM5Q8N1Q8 247 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
COL4A3-202ENST00000396578 PIGSQ96S52 555 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 MXD3Q9BW11 206 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 KRT7P08729 469 aa14.84□□□□□ -0.03
COL4A3-202ENST00000396578 ATP1A3P13637 1013 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms