RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 KIF4AO95239 1232 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 IVLP07476 585 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 PLS3P13797 630 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 KRT76Q01546 638 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 ODF2Q5BJF6 829 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 CTNND1O60716 968 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 KRT5P13647 590 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 ITGB5P18084 799 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 ANXA13P27216 316 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 PPFIA1Q13136 1202 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 DGKZQ13574 1117 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 SNRNP48Q6IEG0 339 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 SLC17A8Q8NDX2 589 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 WRNIP1Q96S55 665 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 BCCIPQ9P287 314 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 PLA2G6O60733 806 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 GALCP54803 685 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 MEI1Q5TIA1 1274 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 POMGNT1Q8WZA1 660 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 AGO4Q9HCK5 861 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 PRDM4Q9UKN5 801 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 DLATP10515 647 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 SFNP31947 248 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 NAA35Q5VZE5 725 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 PCNX4Q63HM2 1172 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 PLA2G4FQ68DD2 849 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 IRF2BP2Q7Z5L9 587 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 NAP1L3Q99457 506 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 TRIM31Q9BZY9 425 aa12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-202ENST00000396410 CNTNAP1P78357 1384 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 HOXD13P35453 343 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 BAATQ14032 418 aaPredicted RBP12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 RUBCNQ92622 972 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 HSPBP1Q9NZL4 362 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 ITIH3Q06033 890 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 TMEM132AQ24JP5 1023 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 DEFB129Q9H1M3 183 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 RSPH14Q9UHP6 348 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 HNRNPDLO14979 420 aaKnown RBP12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 VCAM1P19320 739 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
PDXDC1-202ENST00000396410 PTGER2P43116 358 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 NPEPPSP55786 919 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 IFFO1Q0D2I5 559 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 SAAL1Q96ER3 474 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 CAMKK2Q96RR4 588 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 GMLQ99445 158 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 HACL1Q9UJ83 578 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 F8VZ95 297 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 SPOPO43791 374 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 MYBL2P10244 700 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 ACTN2P35609 894 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 GMPSP49915 693 aaPredicted RBP12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 HMGCS2P54868 508 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 MFAP3P55082 362 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 CBWD6Q4V339 395 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 CBWD3Q5JTY5 395 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 CBWD5Q5RIA9 395 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 UBLCP1Q8WVY7 318 aaPredicted RBP12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 VTI1AQ96AJ9 217 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.4
PDXDC1-202ENST00000396410 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 TMEM150BA6NC51 233 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 RARRES1P49788 294 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 HSD17B4P51659 736 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 HNRNPH2P55795 449 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 STRN3Q13033 797 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 BIRC3Q13489 604 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 PGM5Q15124 567 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC35G2Q8TBE7 412 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms