RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RNF146Q9NTX7 359 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 APEX2Q9UBZ4 518 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 ATP9AO75110 1047 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 N4BP1O75113 896 aaKnown RBP18.28■□□□□ 0.52
NUP50-202ENST00000396096 CCNE2O96020 404 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 H2AFZP0C0S5 128 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 TRIM49P0CI25 452 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 TRIM49CP0CI26 452 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
NUP50-202ENST00000396096 KRT13P13646 458 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 CYP2C19P33261 490 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 NCKAP1LP55160 1127 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 NPEPPSP55786 919 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 DRAP1Q14919 205 aaPredicted RBP18.28■□□□□ 0.52
NUP50-202ENST00000396096 ARHGEF16Q5VV41 709 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 H2AFVQ71UI9 128 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 ZNF280CQ8ND82 737 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 LMO3Q8TAP4 145 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 VTI1AQ96AJ9 217 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 MTFR1LQ9H019 292 aa18.28■□□□□ 0.52
NUP50-202ENST00000396096 BACH1O14867 736 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 PMM2O15305 246 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 MAFGO15525 162 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 CCDC172P0C7W6 258 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 PTPRAP18433 802 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 LMNB1P20700 586 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 ZNF746Q6NUN9 644 aaPredicted RBP18.27■□□□□ 0.52
NUP50-202ENST00000396096 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 VSIG10LQ86VR7 867 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 FAM71BQ8TC56 605 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 RBM12Q9NTZ6 932 aaKnown RBP18.27■□□□□ 0.52
NUP50-202ENST00000396096 SMARCAL1Q9NZC9 954 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 EHD2Q9NZN4 543 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.27■□□□□ 0.52
NUP50-202ENST00000396096 HPCAL4Q9UM19 191 aa18.27■□□□□ 0.52
NUP50-202ENST00000396096 MYBL2P10244 700 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 CCND2P30279 289 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 BAATQ14032 418 aaPredicted RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 NSMFQ6X4W1 530 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 HAUS6Q7Z4H7 955 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 TPCN2Q8NHX9 752 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 LNX1Q8TBB1 728 aaPredicted RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 HVCN1Q96D96 273 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 WNK4Q96J92 1243 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 STIM2Q9P246 746 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 USP20Q9Y2K6 914 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 LOC285556D6RIA3 1793 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 ZC3H4Q9UPT8 1303 aaKnown RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 ZMYND10O75800 440 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 KIF4AO95239 1232 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 DSG3P32926 999 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 KIF22Q14807 665 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 APOBEC3FQ8IUX4 373 aaKnown RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 XXYLT1Q8NBI6 393 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 LMBR1Q8WVP7 490 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 MS4A14Q96JA4 679 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 PBKQ96KB5 322 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 SELENOOQ9BVL4 669 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 MOV10L1Q9BXT6 1211 aaKnown RBP18.26■□□□□ 0.51
NUP50-202ENST00000396096 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 PSD3Q9NYI0 1048 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 RIPK3Q9Y572 518 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 NCANO14594 1321 aa18.26■□□□□ 0.51
NUP50-202ENST00000396096 KIAA1217Q5T5P2 1943 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 ATP2A1O14983 1001 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 VAMP7P51809 220 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 PLS1Q14651 629 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 RPS6KA1Q15418 735 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 C8orf74Q6P047 294 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 NLRX1Q86UT6 975 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 U2AF1L4Q8WU68 220 aaKnown RBP18.25■□□□□ 0.51
NUP50-202ENST00000396096 EXOC4Q96A65 974 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 HSPBP1Q9NZL4 362 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 GJA3Q9Y6H8 435 aa18.25■□□□□ 0.51
NUP50-202ENST00000396096 NR3C2P08235 984 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 ZBTB48P10074 688 aaPredicted RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 TNNT3P45378 269 aaPredicted RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 EPC2Q52LR7 807 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 C1orf220Q5T0J3 134 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 PHLDB3Q6NSJ2 640 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 TAF4BQ92750 862 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 CBWD1Q9BRT8 395 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 TMEM59LQ9UK28 342 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 ZNF214Q9UL59 606 aaPredicted RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 STXBP5LQ9Y2K9 1186 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 PCDHA10Q9Y5I2 948 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 TESPA1A2RU30 521 aaPredicted RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 TMEM253P0C7T8 217 aa18.24■□□□□ 0.51
NUP50-202ENST00000396096 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.51
NUP50-202ENST00000396096 NOP2P46087 812 aaKnown RBP18.24■□□□□ 0.51
NUP50-202ENST00000396096 CETN1Q12798 172 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms