RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LAMA1P25391 3075 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 NFASCO94856 1347 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 KANSL1LA0AUZ9 987 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 LAMA5O15230 3695 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 LAMTOR5O43504 91 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 HBP1O60381 514 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 FLNBO75369 2602 aaKnown RBP15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 C22orf31O95567 290 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 GALTP07902 379 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 GBP2P32456 591 aaPredicted RBP15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 CSTF1Q05048 431 aaKnown RBP15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 TROAPQ12815 778 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 ZNF707Q96C28 371 aaPredicted RBP15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 ADAMTS10Q9H324 1103 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 KCNH7Q9NS40 1196 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 SPATA6Q9NWH7 488 aaPredicted RBP15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 ANGPTL2Q9UKU9 493 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 MTF2Q9Y483 593 aaPredicted RBP15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 LOC400499M0QZD8 3231 aa15.64■□□□□ 0.09
VCPKMT-201ENST00000395859 B4GALT3O60512 393 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 VTNP04004 478 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 TDGF1P13385 188 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 LAMP2P13473 410 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 ATP4AP20648 1035 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 CYB5R4Q7L1T6 521 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 LINC01465Q8N7H1 131 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 STAMQ92783 540 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 PPP1R16BQ96T49 567 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 UBAC1Q9BSL1 405 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 BCO2Q9BYV7 579 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 NRDE2Q9H7Z3 1164 aa15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 PRMT8Q9NR22 394 aaPredicted RBP15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.63■□□□□ 0.09
VCPKMT-201ENST00000395859 MYH15Q9Y2K3 1946 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 CARNS1A5YM72 827 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 ITGB3BPQ13352 177 aaPredicted RBP15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 ZNF484Q5JVG2 852 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 ABHD15Q6UXT9 468 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 TMEM87AQ8NBN3 555 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 RSPH1Q8WYR4 309 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 CUL5Q93034 780 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 CLDN23Q96B33 292 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 SHDQ96IW2 340 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 RPP25Q9BUL9 199 aaKnown RBP15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 KRT23Q9C075 422 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 SENP2Q9HC62 589 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 MAN1C1Q9NR34 630 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 NUMBLQ9Y6R0 609 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 ITPR1Q14643 2758 aa15.62■□□□□ 0.09
VCPKMT-201ENST00000395859 CCDC195A0A1B0GUA6 201 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 LRP3O75074 770 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 ZC3H11AO75152 810 aaKnown RBP eCLIP15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 CCNE2O96020 404 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 EIF4BP23588 611 aaKnown RBP15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 KLRC2P26717 231 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 MAGEA9P43362 315 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 PDE1AP54750 535 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 GPC5P78333 572 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 DMWDQ09019 674 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 FZD5Q13467 585 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 BBXQ8WY36 941 aaPredicted RBP15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 TRAIPQ9BWF2 469 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 EMILIN2Q9BXX0 1053 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 TBC1D13Q9NVG8 400 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 ASH1LQ9NR48 2969 aaKnown RBP15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 DOCK6Q96HP0 2047 aa15.61■□□□□ 0.09
VCPKMT-201ENST00000395859 INPPL1O15357 1258 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 RFPL2O75678 378 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 EFEMP2O95967 443 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 PROS1P07225 676 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 PRKCQQ04759 706 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 SPEM2Q0P670 501 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 CCDC60Q8IWA6 550 aaPredicted RBP15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 RNF169Q8NCN4 708 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 CNNM2Q9H8M5 875 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 DNAJB4Q9UDY4 337 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 GMEB2Q9UKD1 530 aa15.6■□□□□ 0.09
VCPKMT-201ENST00000395859 AKAP13Q12802 2813 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 SHISA7A6NL88 538 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 TM4SF5O14894 197 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 SLC11A1P49279 550 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 HNRNPUQ00839 825 aaKnown RBP eCLIP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 SNW1Q13573 536 aaKnown RBP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 MLF2Q15773 248 aaPredicted RBP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 N4BP2L1Q5TBK1 243 aaPredicted RBP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 TSSK4Q6SA08 328 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 RSPO2Q6UXX9 243 aaPredicted RBP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 FGF14Q92915 247 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 MXRA8Q9BRK3 442 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 SPZ1Q9BXG8 430 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 FAM126AQ9BYI3 521 aaPredicted RBP15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 LTB4R2Q9NPC1 389 aa15.59■□□□□ 0.09
VCPKMT-201ENST00000395859 MTCL1Q9Y4B5 1905 aaKnown RBP15.58■□□□□ 0.09
VCPKMT-201ENST00000395859 F5P12259 2224 aa15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 RPS9P46781 194 aaKnown RBP15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 MFAP1P55081 439 aaKnown RBP15.58■□□□□ 0.08
VCPKMT-201ENST00000395859 NLRP11P59045 1033 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms