RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 HINFPQ9BQA5 517 aa12.27□□□□□ -0.44
RAE1-203ENST00000395841 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.44
RAE1-203ENST00000395841 SAMM50Q9Y512 469 aa12.27□□□□□ -0.44
RAE1-203ENST00000395841 RNF40O75150 1001 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 PHACTR2O75167 634 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 DDNO94850 711 aaPredicted RBP12.27□□□□□ -0.45
RAE1-203ENST00000395841 KIF4AO95239 1232 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 CCDC172P0C7W6 258 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 PLS3P13797 630 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 LMNB1P20700 586 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 RFX1P22670 979 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 MRPS25P82663 173 aaKnown RBP12.27□□□□□ -0.45
RAE1-203ENST00000395841 ANGEL2Q5VTE6 544 aaKnown RBP12.27□□□□□ -0.45
RAE1-203ENST00000395841 SND1Q7KZF4 910 aaKnown RBP eCLIP12.27□□□□□ -0.453e-7■■■■□ 24
RAE1-203ENST00000395841 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 IFT20Q8IY31 132 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.45
RAE1-203ENST00000395841 PBKQ96KB5 322 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 ACCSQ96QU6 501 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 TIPINQ9BVW5 301 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 PPP1R9AQ9ULJ8 1098 aa12.27□□□□□ -0.45
RAE1-203ENST00000395841 FZD9O00144 591 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 KRT13P13646 458 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 LMAN1P49257 510 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 NPEPPSP55786 919 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 PLS1Q14651 629 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 MAEAQ7L5Y9 396 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 USP38Q8NB14 1042 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 LNX1Q8TBB1 728 aaPredicted RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 U2AF1L4Q8WU68 220 aaKnown RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 CAVIN3Q969G5 261 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 TAAR1Q96RJ0 339 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 GPR88Q9GZN0 384 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 GOLGA6BA6NDN3 693 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 KCNK3O14649 394 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 ZBED4O75132 1171 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 VCAM1P19320 739 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 EIF2AK2P19525 551 aaKnown RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 GGCXP38435 758 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 HIRAP54198 1017 aaPredicted RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 RPS6P62753 249 aaKnown RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 PGM5Q15124 567 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 TAF3Q5VWG9 929 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 INTS8Q75QN2 995 aaKnown RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 SLFN11Q7Z7L1 901 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 SYCE1Q8N0S2 351 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 SYT11Q9BT88 431 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 ST6GALNAC4Q9H4F1 302 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 GDF3Q9NR23 364 aa12.26□□□□□ -0.45
RAE1-203ENST00000395841 CTDP1Q9Y5B0 961 aaPredicted RBP12.26□□□□□ -0.45
RAE1-203ENST00000395841 AGPSO00116 658 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 RPS12P25398 132 aaKnown RBP12.25□□□□□ -0.45
RAE1-203ENST00000395841 YWHABP31946 246 aaKnown RBP12.25□□□□□ -0.45
RAE1-203ENST00000395841 TNNC1P63316 161 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 SPP2Q13103 211 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 NNTQ13423 1086 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 DNAAF5Q86Y56 855 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 C4orf19Q8IY42 314 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 RDH13Q8NBN7 331 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 CCDC43Q96MW1 224 aaKnown RBP12.25□□□□□ -0.45
RAE1-203ENST00000395841 FAM204AQ9H8W3 233 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 TMEM59LQ9UK28 342 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 LOXHD1Q8IVV2 1947 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 GLI1P08151 1106 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 FDX1P10109 184 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 JAK3P52333 1124 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
RAE1-203ENST00000395841 MTMR2Q13614 643 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 LMO3Q8TAP4 145 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 ACTRT1Q8TDG2 376 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 RMDN3Q96TC7 470 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 KRT12Q99456 494 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 RPAP3Q9H6T3 665 aaPredicted RBP12.25□□□□□ -0.45
RAE1-203ENST00000395841 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
RAE1-203ENST00000395841 P4HA2O15460 535 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 HEXIM1O94992 359 aaKnown RBP12.24□□□□□ -0.45
RAE1-203ENST00000395841 TMEM253P0C7T8 217 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 MYCLP12524 364 aaPredicted RBP12.24□□□□□ -0.45
RAE1-203ENST00000395841 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.454e-6■■□□□ 13.4
RAE1-203ENST00000395841 SFNP31947 248 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 GALCP54803 685 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 GTF2BQ00403 316 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 CETN1Q12798 172 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 PHLDB3Q6NSJ2 640 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 PEX26Q7Z412 305 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 GOLGA6L1Q8N7Z2 621 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 SLC17A8Q8NDX2 589 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 TRERF1Q96PN7 1200 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 PDCD2LQ9BRP1 358 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 SUCLA2Q9P2R7 463 aaPredicted RBP12.24□□□□□ -0.45
RAE1-203ENST00000395841 STXBP5LQ9Y2K9 1186 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 NCANO14594 1321 aa12.24□□□□□ -0.45
RAE1-203ENST00000395841 WDR64B1ANS9 1081 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms