RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 BACE1P56817 501 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 COG7P83436 770 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 GABPAQ06546 454 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 BAATQ14032 418 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 ASIC2Q16515 512 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MAP7D1Q3KQU3 841 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ARMC3Q5W041 872 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CCNI2Q6ZMN8 369 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 RRAGAQ7L523 313 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ANKRD13AQ8IZ07 590 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MCUR1Q96AQ8 359 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 AGBL1Q96MI9 1066 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 EIF2AK1Q9BQI3 630 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 NKIRAS1Q9NYS0 192 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 TARSL2A2RTX5 802 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 NDUFA10O95299 355 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 KRT14P02533 472 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ICAM1P05362 532 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ATP2A2P16615 1042 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 SFNP31947 248 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 DPYDQ12882 1025 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 MAN2A1Q16706 1144 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 TCP11X2Q5H9J9 407 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SFMBT2Q5VUG0 894 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 TAOK1Q7L7X3 1001 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 EEPD1Q7L9B9 569 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SDCCAG8Q86SQ7 713 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 GIMAP8Q8ND71 665 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 GJA10Q969M2 543 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ITFG2Q969R8 447 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ACCSQ96QU6 501 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 C7orf25Q9BPX7 421 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ELAC2Q9BQ52 826 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 TMEM206Q9H813 350 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 RAB21Q9UL25 225 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ROBO3Q96MS0 1386 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 H0Y3Z8 333 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 MFAP3LO75121 409 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 FAM107AO95990 144 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 RASSF2P50749 326 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 CCDC92Q53HC0 331 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 TATDN1Q6P1N9 297 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 WDR93Q6P2C0 686 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 PDXDC2PQ6P474 469 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 PPP4R3CPQ6ZMV5 832 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ARHGAP22Q7Z5H3 698 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ZBTB8OSQ8IWT0 167 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 KLHL23Q8NBE8 558 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SLC7A3Q8WY07 619 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 MMS19Q96T76 1030 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 LSM14BQ9BX40 385 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 TRIM9Q9C026 710 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 PDGFDQ9GZP0 370 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 TUFT1Q9NNX1 390 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 NLRC4Q9NPP4 1024 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 A1CFQ9NQ94 594 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.13□□□□□ -1.43
RFFL-202ENST00000394597 RGL1Q9NZL6 768 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 PAIP2BQ9ULR5 123 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 TACC3Q9Y6A5 838 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 C4BP0C0L5 1744 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 TCHHQ07283 1943 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 POTEFA5A3E0 1075 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 CFAP73A6NFT4 308 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 DNAJC8O75937 253 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 POTEIP0CG38 1075 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 TNFAIP3P21580 790 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 PSMC2P35998 433 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 QARSP47897 775 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 LIG4P49917 911 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SNX1Q13596 522 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 EARS2Q5JPH6 523 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 POTEGQ6S5H5 508 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 POTEEQ6S8J3 1075 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 MOXD1Q6UVY6 613 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 RASGRP2Q7LDG7 609 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SLC51AQ86UW1 340 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 EXOC8Q8IYI6 725 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 METTL13Q8N6R0 699 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ANKRD13CQ8N6S4 541 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 GBP7Q8N8V2 638 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 RETREG2Q8NC44 543 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ATG4CQ96DT6 458 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 CYFIP2Q96F07 1278 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 STAMBPL1Q96FJ0 436 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ATP6V1G3Q96LB4 118 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 CEP63Q96MT8 703 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 ZMAT2Q96NC0 199 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 KRT12Q99456 494 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 FHDC1Q9C0D6 1143 aaPredicted RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 KIAA1683Q9H0B3 1180 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 RMI1Q9H9A7 625 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 MTRF1LQ9UGC7 380 aaKnown RBP6.13□□□□□ -1.43
RFFL-202ENST00000394597 RASAL2Q9UJF2 1139 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SH3BP1Q9Y3L3 701 aa6.13□□□□□ -1.43
RFFL-202ENST00000394597 SFI1A8K8P3 1242 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 TXNDC9O14530 226 aa6.12□□□□□ -1.43
RFFL-202ENST00000394597 BCRP11274 1271 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms