RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SPECC1Q5M775 1068 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 FAM117BQ6P1L5 589 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 TIFAQ96CG3 184 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 TSPYL2Q9H2G4 693 aaPredicted RBP21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 IFT122Q9HBG6 1241 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 GPRC5CQ9NQ84 441 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 CCDC39Q9UFE4 941 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 ATP6V1DQ9Y5K8 247 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 UPP2O95045 317 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 SSBP05455 408 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 ZSCAN20P17040 1043 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 FGFR4P22455 802 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 GLRA2P23416 452 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 PHKA2P46019 1235 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 DNM1Q05193 864 aaKnown RBP21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 KARSQ15046 597 aaKnown RBP21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 TMCO2Q7Z6W1 182 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 ASAP3Q8TDY4 903 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 EPSTI1Q96J88 318 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 RAD9AQ99638 391 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 ADAM2Q99965 735 aa21.07■□□□□ 0.96
PDLIM7-204ENST00000393546 LAMA3Q16787 3333 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 PLA2G4BP0C869 781 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 NUCB2P80303 420 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 RINT1Q6NUQ1 792 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 USP49Q70CQ1 688 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 CATSPER4Q7RTX7 472 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 SYT2Q8N9I0 419 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 KCNG4Q8TDN1 519 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 LINC01599Q8WXQ3 324 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 SYMPKQ92797 1274 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 KIFAP3Q92845 792 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 RGS18Q9NS28 235 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 C1orf112Q9NSG2 853 aa21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 RNF216Q9NWF9 866 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 YBX2Q9Y2T7 364 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-204ENST00000393546 TMEM265A0A087WTH1 108 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 MGEA5O60502 916 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 CUTAO60888 179 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 MYOGP15173 224 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 PLCG1P19174 1290 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 ANP32AP39687 249 aaKnown RBP21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 PTENP60484 403 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 CAPSQ13938 189 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 DSC3Q14574 896 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 ZNF697Q5TEC3 545 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 C1orf186Q6ZWK4 172 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 SLC24A5Q71RS6 500 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 IFT74Q96LB3 600 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 NKX2-4Q9H2Z4 354 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 SLC28A3Q9HAS3 691 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 CHST12Q9NRB3 414 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 INSL6Q9Y581 213 aa21.05■□□□□ 0.96
PDLIM7-204ENST00000393546 PTPRSQ13332 1948 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 STAG3L1P0CL83 205 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 SARSP49591 514 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 SLC12A3P55017 1021 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 PPP2R5AQ15172 486 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 PCBP1Q15365 356 aaKnown RBP eCLIP21.04■□□□□ 0.964e-10■■■■■ 32.7
PDLIM7-204ENST00000393546 RRAGBQ5VZM2 374 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 IFNLR1Q8IU57 520 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 TIPINQ9BVW5 301 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 NFKBIZQ9BYH8 718 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 MINDY3Q9H8M7 445 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 POLD4Q9HCU8 107 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 DACT1Q9NYF0 836 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 KCND2Q9NZV8 630 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 RCOR1Q9UKL0 485 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 LRFN2Q9ULH4 789 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 TTC3P53804 2025 aa21.04■□□□□ 0.96
PDLIM7-204ENST00000393546 LAMA2P24043 3122 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 GBF1Q92538 1859 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 LRRIQ4A6NIV6 560 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 NCLP19338 710 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 DDIT3P35638 169 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 KRT85P78386 507 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 NCBP1Q09161 790 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 NPAS4Q8IUM7 802 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 ZBTB8OSQ8IWT0 167 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 DEFB123Q8N688 67 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 RAD54LQ92698 747 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 DRC1Q96MC2 740 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 YME1L1Q96TA2 773 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 RUSC1Q9BVN2 902 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 SEMA6BQ9H3T3 888 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 BLOC1S4Q9NUP1 217 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 PCDHB7Q9Y5E2 793 aa21.03■□□□□ 0.96
PDLIM7-204ENST00000393546 C9IYK1 514 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 INO80B-WBP1J3KQ70 363 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 HIP1RO75146 1068 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 CA3P07451 260 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 IBSPP21815 317 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 GUCY2CP25092 1073 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 NAMPTP43490 491 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 ME1P48163 572 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 FAM189BP81408 668 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 HTRA4P83105 476 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 DHX8Q14562 1220 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 CCDC73Q6ZRK6 1079 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 C2orf40Q9H1Z8 148 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms