RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SNX25Q9H3E2 840 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 SUN2Q9UH99 717 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 BLVRAP53004 296 aa17.21■□□□□ 0.34
SHANK1-204ENST00000391814 PLD3Q8IV08 490 aa17.21■□□□□ 0.34
SHANK1-204ENST00000391814 HACD3Q9P035 362 aa17.21■□□□□ 0.34
SHANK1-204ENST00000391814 CNOT8Q9UFF9 292 aaKnown RBP17.21■□□□□ 0.34
SHANK1-204ENST00000391814 GNAT1P11488 350 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 BTDP43251 543 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF564Q8TBZ8 553 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ERP27Q96DN0 273 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 TLR3O15455 904 aaKnown RBP17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ZSWIM5Q9P217 1185 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 SNX12Q9UMY4 172 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 MIF4GDA9UHW6 222 aaKnown RBP17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ADD2P35612 726 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 TRIM60Q495X7 471 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ANP32DO95626 131 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 KCNA1Q09470 495 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 RABGAP1LQ5R372 815 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 AGBL2Q5U5Z8 902 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 ZBTB18Q99592 522 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 TRABDQ9H4I3 376 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 PKD2L2Q9NZM6 624 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 PCDHA1Q9Y5I3 950 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 PLEKHA8P1O95397 391 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 HADHAP40939 763 aa17.2■□□□□ 0.34
SHANK1-204ENST00000391814 PAWRQ96IZ0 340 aaKnown RBP17.2■□□□□ 0.34
SHANK1-204ENST00000391814 MXI1P50539 228 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 TMCO5AQ8N6Q1 288 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 OSBP2Q969R2 916 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 ATP6V1E1P36543 226 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 DSG1Q02413 1049 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 ZC3H12BQ5HYM0 836 aaKnown RBP17.19■□□□□ 0.34
SHANK1-204ENST00000391814 PPP1R2P3Q6NXS1 205 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 MAGEA13PA6NCF6 341 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 PDE5AO76074 875 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 SLC16A2P36021 539 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 VHLP40337 213 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 IZUMO3Q5VZ72 239 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 SLC17A8Q8NDX2 589 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 FAM81BQ96LP2 452 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 CCT7Q99832 543 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 THTPAQ9BU02 230 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 GID8Q9NWU2 228 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 PAX7P23759 505 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 KRT26Q7Z3Y9 468 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 RNF25Q96BH1 459 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-204ENST00000391814 FHOD1Q9Y613 1164 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 APOL6Q9BWW8 343 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 TSSK1BQ9BXA7 367 aa17.19■□□□□ 0.34
SHANK1-204ENST00000391814 IGBP1P78318 339 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 LCORLQ8N3X6 602 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 ALKBH8Q96BT7 664 aaKnown RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 M0QZ92 97 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 IL10P22301 178 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 TARSP26639 723 aaKnown RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 COPB2P35606 906 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 DHX34Q14147 1143 aaKnown RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 CCNYL1Q8N7R7 359 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 MARK3P27448 753 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 MLH1P40692 756 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 PARVGQ9HBI0 331 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 IVNS1ABPQ9Y6Y0 642 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 HSPA2P54652 639 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 CHURC1Q8WUH1 139 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF18P17022 549 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 CTTNQ14247 550 aaKnown RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 RBM41Q96IZ5 413 aaKnown RBP17.18■□□□□ 0.34
SHANK1-204ENST00000391814 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
SHANK1-204ENST00000391814 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 WDR47O94967 919 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 SERPINB2P05120 415 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 TCIRG1Q13488 830 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 BYSLQ13895 437 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 FAM47CQ5HY64 1035 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 HEXIM2Q96MH2 286 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 WWP1Q9H0M0 922 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 UNC13DQ70J99 1090 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 PBXIP1Q96AQ6 731 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 TMA16Q96EY4 203 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 RBM12Q9NTZ6 932 aaKnown RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 ATP6V1B1P15313 513 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 IFNAR1P17181 557 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 EAPPQ56P03 285 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-204ENST00000391814 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 ERICH1Q86X53 443 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 FAM149B1Q96BN6 582 aa17.17■□□□□ 0.34
SHANK1-204ENST00000391814 H0Y626 953 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms