RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CTDP1Q9Y5B0 961 aaPredicted RBP1.94□□□□□ -2.1
SNORD28B-201ENST00000390993 TNPO3Q9Y5L0 923 aaKnown RBP1.94□□□□□ -2.1
SNORD28B-201ENST00000390993 KRTAP23-1A1A580 65 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 MATN2O00339 956 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 TRAF5O00463 557 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 RAB11FIP3O75154 756 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 GLRX3O76003 335 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 RHOBTB3O94955 611 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 C1SP09871 688 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 JMJD7P0C870 316 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 GYPEP15421 78 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 ADCY7P51828 1080 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 KLF10Q13118 480 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 RRP1BQ14684 758 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 BMS1Q14692 1282 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 PTPAQ15257 358 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 SEC23AQ15436 765 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 TCEA2Q15560 299 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 DDB1Q16531 1140 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CRB2Q5IJ48 1285 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 FKBP15Q5T1M5 1219 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 Q6ZSN1 163 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 ESPNLQ6ZVH7 1005 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 APBB1IPQ7Z5R6 666 aaPredicted RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 MRGPRGQ86SM5 289 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 RTN4RL1Q86UN2 441 aaPredicted RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 KIF18BQ86Y91 864 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 HOMER1Q86YM7 354 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 GPR135Q8IZ08 494 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CMTM4Q8IZR5 234 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 JMYQ8N9B5 988 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 IL17DQ8TAD2 202 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CACTINQ8WUQ7 758 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 RSAD2Q8WXG1 361 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CFHR4Q92496 578 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 HAS1Q92839 578 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 ZG16BQ96DA0 208 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CLIP3Q96DZ5 547 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CHFRQ96EP1 664 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 SCLYQ96I15 445 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 DRC1Q96MC2 740 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CEP89Q96ST8 783 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 DNAJC2Q99543 621 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 NOL10Q9BSC4 688 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 GPR87Q9BY21 358 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 OSBPL6Q9BZF3 934 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 ZSWIM4Q9H7M6 989 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 NRDE2Q9H7Z3 1164 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 MMRN2Q9H8L6 949 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 TRIM39Q9HCM9 518 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 IL23AQ9NPF7 189 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 INTS7Q9NVH2 962 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 USP36Q9P275 1121 aaKnown RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 B4GALT6Q9UBX8 382 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 DNAI1Q9UI46 699 aa1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 CDK11AQ9UQ88 783 aaPredicted RBP1.93□□□□□ -2.1
SNORD28B-201ENST00000390993 UBE2QL1A1L167 161 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 RASSF10A6NK89 507 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 OVOL3O00110 214 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 NARSO43776 548 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 RFPL3O75679 317 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 TOX4O94842 621 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 PRPF6O94906 941 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 ASMTLO95671 621 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 SPATA31D3P0C874 917 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 HSP90B1P14625 803 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 KIR2DL3P43628 341 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 RGS3P49796 1198 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 SCNN1BP51168 640 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 MECP2P51608 486 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 KPNA1P52294 538 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 WNT3AP56704 352 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 DUSP8Q13202 625 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 CCDC178Q5BJE1 867 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 DCAF17Q5H9S7 520 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 LY6G5CQ5SRR4 150 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 GJC2Q5T442 439 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 CDCA2Q69YH5 1023 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 IQSEC1Q6DN90 963 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 KIAA1841Q6NSI8 718 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 FAM180AQ6UWF9 173 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 SPATA31D4Q6ZUB0 917 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 PDZD4Q76G19 769 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 FGD2Q7Z6J4 655 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 CLEC14AQ86T13 490 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 PPM1KQ8N3J5 372 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 CDYL2Q8N8U2 506 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 GLB1L3Q8NCI6 653 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 OR5M3Q8NGP4 307 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 SH3TC2Q8TF17 1288 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 SLC25A43Q8WUT9 341 aaPredicted RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 ATXN2LQ8WWM7 1075 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 ST8SIA2Q92186 375 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 UBXN4Q92575 508 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 APPBP2Q92624 585 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 PAWRQ96IZ0 340 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 CRAMP1Q96RY5 1269 aa1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 EIF2B4Q9UI10 523 aaKnown RBP1.92□□□□□ -2.1
SNORD28B-201ENST00000390993 SH3BP1Q9Y3L3 701 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms