RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 TCP11Q8WWU5 503 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 NLRP7Q8WX94 980 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 CHST12Q9NRB3 414 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 TMEM161AQ9NX61 479 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 DBR1Q9UK59 544 aaKnown RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 MTUS1Q9ULD2 1270 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 PCDHB7Q9Y5E2 793 aa12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
IGHV4-28-201ENST00000390612 C5orf42Q9H799 3197 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 A0A087WWV3 80 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 LAD1O00515 517 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 DGAT1O75907 488 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 ARL2P36404 184 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 LAMTOR4Q0VGL1 99 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 RILPL1Q5EBL4 403 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 FAM102BQ5T8I3 360 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 SRGAP1Q7Z6B7 1085 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 ECHDC2Q86YB7 292 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 PIGOQ8TEQ8 1089 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 PLVAPQ9BX97 442 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 INO80BQ9C086 356 aaPredicted RBP12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 MINDY3Q9H8M7 445 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
IGHV4-28-201ENST00000390612 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 ZNF623O75123 536 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 EOMESO95936 686 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 PTENP60484 403 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 ATP2C1P98194 919 aaPredicted RBP12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 GPM6BQ13491 265 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 MXD4Q14582 209 aaPredicted RBP12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 ECM1Q16610 540 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 PPM1EQ8WY54 764 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 P2RX5Q93086 422 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 MRPL38Q96DV4 380 aaKnown RBP12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 NLRP4Q96MN2 994 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 NACC1Q96RE7 527 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 MTRQ99707 1265 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
IGHV4-28-201ENST00000390612 H3BQV1 296 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 SRGAP2CP0DJJ0 459 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 SFPQP23246 707 aaKnown RBP eCLIP12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 HOXA11P31270 313 aaPredicted RBP12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 CTNNB1P35222 781 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 CAMK1Q14012 370 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 NAALADL2Q58DX5 795 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 ERMNQ8TAM6 284 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 ASAP3Q8TDY4 903 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 SCLT1Q96NL6 688 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 CASD1Q96PB1 797 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 TMEM117Q9H0C3 514 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 ATP6V0A4Q9HBG4 840 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 LRWD1Q9UFC0 647 aa12.68□□□□□ -0.38
IGHV4-28-201ENST00000390612 MYH15Q9Y2K3 1946 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 GRM6O15303 877 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 FGFR1P11362 822 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 GLRA2P23416 452 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 PHKA2P46019 1235 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 CAPSQ13938 189 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 CLLU1OSQ5K130 101 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 HYIQ5T013 277 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 LRRC55Q6ZSA7 311 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 RNF149Q8NC42 400 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 SPPL3Q8TCT6 385 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 ATXN2LQ8WWM7 1075 aaKnown RBP12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 SNX21Q969T3 373 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 C11orf84Q9BUA3 381 aaPredicted RBP12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 LMAN2LQ9H0V9 348 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 CWH43Q9H720 699 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 PLAGL2Q9UPG8 496 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
IGHV4-28-201ENST00000390612 TDRD15B5MCY1 1934 aaKnown RBP12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 TBKBP1A7MCY6 615 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 HOXA2O43364 376 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 ITGB1P05556 798 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 CYP11B2P19099 503 aa12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
IGHV4-28-201ENST00000390612 AMHR2Q16671 573 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms